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qh_10_scaffold_1891_10

Organism: QH_10_Viridiplantae_55_7

partial RP 26 / 55 MC: 11 BSCG 22 / 51 MC: 5 ASCG 14 / 38 MC: 5
Location: 8042..9982

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Brassica rapa subsp. pekinensis RepID=M4EZC9_BRARP similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 635.0
  • Bit_score: 681
  • Evalue 1.00e-192
Uncharacterized protein {ECO:0000313|EnsemblPlants:Bra034172.1-P}; TaxID=51351 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 635.0
  • Bit_score: 681
  • Evalue 1.50e-192
putative splicing factor similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 633.0
  • Bit_score: 672
  • Evalue 1.50e-190

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Taxonomy

Brassica rapa → Brassica → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1941
ATGCACCTGTACCACCAGACGCTTGCGACAGCCACTGGCTGCACTCAGGCTGTGCATGGGAGCTTCACAGCGCCAAAAGCGCAGGAGCTCGTGCTAAACCATGGCACAAGCCTCGAGCTTCTCCGGCCCGATGACTCTGGACGTTTGCAGCAGATCCACTTCACCTCCGCCTTCTCCACCATCCGCTCCCTCGACTGCTTTCGCATCGTCGGGGGCCAGTGCGACTACCTCGCCGTCGGCAGTGACAGCGGCCGCATCGTCATCCTTCTCTTCAGTCGCAAGCTCTCCTGCTTCCAGAAGGTCCATGAGGAAACCTTCGGCAAGAGCGGCAGCCGACGCAATGTCCCTGGCCAGTACATCACATGTGACCCTTCCGGCCGTGCCGTCCTCGTCGGCGCCATCGAGAAGCAGAAGCTCGTCTATATACTTAACCGCGATGGTGACGCCAACCTCACCATCTCCTCGCCGCTCGAGGCGCATAAGTCCAGCACTCTCTGCTGGAATGCAGTTGCACTTGACTGCGGCTACGATAATCCCTACTTCGCTGCAATTGAGCTTGACTACACTGACGCTGACGAACTGCCCGAGGATGGCAGCGACCCTCCTCCAGGAGCGTCCCTCCAGCAAATGCTCACCTTTTACTTCGTCGATCTTGGTCTGAACCATGTCGTTAGACAGACGACCACTCCACTCGAAACGCGCGCTAATCGCCTCGTCACCGTGCCTGGAGGCTCGCAAGGCGGCCCGGGTGGCGTCCTTGTCTGCAGCGAGGATTACATCTCGTACATGAACGAAAATCACTCTGAAGTCAGAGCTGCGCTCCCACGCCGCGACAACCTACCCGCCGAACGCAGCGTGCTCATCACCTGCACAAGCACCTACATCAGGAAGAAAAACCAGCAGGTGACCCTCTTCTTTCTTGTGCAAAGCGAGTATGGTGATCTGTACAAAGTCACGCTCGATCACAGCCAAGGCCACGTGTCCGACGTAGTCGTAAGCTACTTCGATACTATTCCGCCTGCTGTTTCAATTTGCCTTATGAAATCGGGCATTCTCTTCGCAGCATCGTCCACTGGAAACCACCAGCTCTTCCAGGTAAGTGATCTTGGCGAGAACGAGCCAGTGAAAGTGCGCGCAACGGATTCGACAACAGAGTCAATGCACTTCTCACCACGCAAGTTGAGCAATCTCGTCCTCATCGACAGCATGGACTCCCTAAGTCCGATTGTTGACCTTCAGCCCTGCTTCATGAGCGGCGAGCAAACGCCTCGCTTGTACGCTGCTTGTGGCGCGAGCACTCGTTCTTCGTTCAAAATTGTCCGTCAGGGTATGGCTCTCTCTGAGCTTGCTGTATCCTCACTTCCTGGTGTTCCAAAGGCAGTCTCGACAGTCAAGTTATCAAACTCGCATGTGCATGACTCGTATATTGTTGTGTCCTTTGTCAACTCAACCTTGGTCCTCTCCGTCGGCGAGACGGTCGAGGAGGTGTCTGATAGTGGGCTGCTGGACTCCGTGTCGACAATGGACGTAAGCTTATTACGAGACGAAACGCTAGTGCAAGTCCACGAGGGTGGGATCCGTCATATCAAACAGGACAGACGTGCGAACGAGTGGAAAACTCCAGGGCGCAAGAAGATTAATAGAGTGAGCGTGAATACAACTCAAGTCGTTGTTGCGCTCGACAGCGGCGAAGTTGTATACTTTGAGCTCGAAAGCGGTGGCCAGCTGCTTGAGGTGGACAAGAAAGACATGGGCGCCGATGTGGCTTCGCTTGCACTCGGAGAGGTACCGAGAGAGCGACAACGCTCTAGCCTCTTAGCCGTCGGCACGTACAACCAGAGCGTTCGTGTGCTCAGACTTGAACCCGATGCATATCTGCAGGTGCGTTTTGATCGCAACAAAAATCTCGTAATCCTAATGTTGGCCGACTCTTCTATCTGA
PROTEIN sequence
Length: 647
MHLYHQTLATATGCTQAVHGSFTAPKAQELVLNHGTSLELLRPDDSGRLQQIHFTSAFSTIRSLDCFRIVGGQCDYLAVGSDSGRIVILLFSRKLSCFQKVHEETFGKSGSRRNVPGQYITCDPSGRAVLVGAIEKQKLVYILNRDGDANLTISSPLEAHKSSTLCWNAVALDCGYDNPYFAAIELDYTDADELPEDGSDPPPGASLQQMLTFYFVDLGLNHVVRQTTTPLETRANRLVTVPGGSQGGPGGVLVCSEDYISYMNENHSEVRAALPRRDNLPAERSVLITCTSTYIRKKNQQVTLFFLVQSEYGDLYKVTLDHSQGHVSDVVVSYFDTIPPAVSICLMKSGILFAASSTGNHQLFQVSDLGENEPVKVRATDSTTESMHFSPRKLSNLVLIDSMDSLSPIVDLQPCFMSGEQTPRLYAACGASTRSSFKIVRQGMALSELAVSSLPGVPKAVSTVKLSNSHVHDSYIVVSFVNSTLVLSVGETVEEVSDSGLLDSVSTMDVSLLRDETLVQVHEGGIRHIKQDRRANEWKTPGRKKINRVSVNTTQVVVALDSGEVVYFELESGGQLLEVDKKDMGADVASLALGEVPRERQRSSLLAVGTYNQSVRVLRLEPDAYLQVRFDRNKNLVILMLADSSI*