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QH_11_UNK

In projects: QH_11

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.64 Longest contig: 134.36 Kbp Bin length: 104.22 Mbp GC content: 62.13 %
Contigs count: 31177 Features count: 126136 rRNAs count: 22 tRNAs count: 1281

Genome completeness

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Displaying items 51-100 of 31177 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_11_scaffold_22998 4 1224 bp 43.71 3.68 98.04
qh_11_scaffold_23142
Species: Natrialba aegyptia (100%)
2 1219 bp 39.70 3.69 56.36
qh_11_scaffold_27341
Species: Halogeometricum borinquense (50%)
2 1057 bp 38.69 3.69 95.08
qh_11_scaffold_24353
Species: Natronococcus jeotgali (50%)
2 1166 bp 39.71 3.69 93.14
qh_11_scaffold_46522 3 1269 bp 49.01 3.70 89.60
qh_11_scaffold_20302
Species: Synechococcus sp. PCC 7335 (50%)
2 1353 bp 33.41 3.70 98.23
qh_11_scaffold_40785 4 2102 bp 35.30 3.71 51.81
qh_11_scaffold_26704
Species: RBG_13_Euryarchaeota_31_8_curated (50%)
2 1078 bp 38.50 3.71 99.35
qh_11_scaffold_26807
Species: Halogeometricum pallidum (100%)
1 1074 bp 34.64 3.72 79.89
qh_11_scaffold_10241 3 2231 bp 34.02 3.72 85.79
qh_11_scaffold_23316 2 1211 bp 45.17 3.72 63.17
qh_11_scaffold_34867
Species: RLO_RIF_OD1_11_43_20 (50%)
2 1797 bp 31.39 3.73 35.73
qh_11_scaffold_18300
Species: R_OD1_Giovannonibacteria_46_13 (50%)
2 1471 bp 49.90 3.74 98.71
qh_11_scaffold_18312 1 1470 bp 34.97 3.74 99.80
qh_11_scaffold_16025
Species: CG_Magasa_01 (50%)
2 1627 bp 32.15 3.75 66.93
qh_11_scaffold_21807 2 1279 bp 43.47 3.75 74.59
qh_11_scaffold_21243
Species: Natrialba taiwanensis (100%)
2 1306 bp 46.86 3.75 97.86
qh_11_scaffold_28177 2 1031 bp 42.68 3.78 98.35
qh_11_scaffold_16949
Class: RIF-OD1-1 (100%)
3 2246 bp 47.11 3.78 88.56
qh_11_scaffold_28963
Species: Haloquadratum walsbyi (50%)
2 1006 bp 39.26 3.78 84.39
qh_11_scaffold_25809 2 1110 bp 39.01 3.78 94.59
qh_11_scaffold_32755
Species: marine sediment metagenome (50%)
2 1530 bp 33.73 3.79 90.00
qh_11_scaffold_24456
Species: RIFOXYB1_FULL_OD1_Magasanikbacteria_40_15_curated (100%)
1 1161 bp 35.66 3.79 91.99
qh_11_scaffold_23793
Species: Caulobacter phage Cr30 (50%)
2 1188 bp 34.68 3.79 94.19
qh_11_scaffold_29194
Species: RIFOXYD12_FULL_Rhodospirillales_60_8_curated (50%)
2 1000 bp 38.50 3.80 75.00
qh_11_scaffold_28387 1 1025 bp 55.51 3.80 99.80
qh_11_scaffold_23393 3 1207 bp 30.16 3.81 93.70
qh_11_scaffold_15825 3 2936 bp 39.58 3.81 56.51
qh_11_scaffold_25416
Species: Candidatus Haloredivivus sp. G17 (50%)
2 1125 bp 38.13 3.82 82.13
qh_11_scaffold_20177
Species: Halococcus salifodinae (50%)
2 1361 bp 38.35 3.82 84.86
qh_11_scaffold_40974
Species: R_OD1_Magasanikbacteria_51_14 (66.67%)
3 1255 bp 33.07 3.82 88.45
qh_11_scaffold_28503 4 1021 bp 43.88 3.82 53.09
qh_11_scaffold_24675
Species: CG_Magasa_02 (100%)
1 1152 bp 37.50 3.82 95.57
qh_11_scaffold_26900
Species: GWA2_OD1_43_9 (100%)
1 1071 bp 36.51 3.83 99.72
qh_11_scaffold_22390 3 1252 bp 38.18 3.83 70.21
qh_11_scaffold_17352
Species: Dehalococcoides mccartyi (50%)
2 1533 bp 45.99 3.85 89.04
qh_11_scaffold_17330 3 1534 bp 47.59 3.85 53.98
qh_11_scaffold_23091 2 1221 bp 56.35 3.85 95.58
qh_11_scaffold_23805
Order: Halobacteriales (66.67%)
3 1188 bp 40.24 3.87 83.59
qh_11_scaffold_28882 2 1009 bp 41.72 3.87 98.12
qh_11_scaffold_27143 3 1654 bp 34.76 3.87 92.32
qh_11_scaffold_26574
Species: R_OD1_Magasanikbacteria_47_14 (50%)
2 1082 bp 43.25 3.88 85.95
qh_11_scaffold_37683 1 1341 bp 37.88 3.88 68.90
qh_11_scaffold_15816
Class: Magasanikbacteria (66.67%)
3 1644 bp 33.88 3.89 99.09
qh_11_scaffold_27447
Species: Scytonema millei (50%)
2 1053 bp 58.69 3.89 49.86
qh_11_scaffold_29090
Species: RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated (50%)
2 1003 bp 30.31 3.89 84.95
qh_11_scaffold_18489
Species: CG_Magasa_01 (100%)
1 1460 bp 34.66 3.90 81.16
qh_11_scaffold_31041
Class: Magasanikbacteria (66.67%)
3 2227 bp 31.34 3.91 57.79
qh_11_scaffold_22349 2 1254 bp 38.60 3.91 48.09
qh_11_scaffold_17746
Species: Singulisphaera acidiphila (50%)
2 1508 bp 52.59 3.91 79.58
Displaying items 51-100 of 31177 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.