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QH_2_UNK

In projects: QH_2  |  diaphorachaeota
Displaying items 1-50 of 21073 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_2_scaffold_10
Class: Halobacteria (56.86%)
51 59562 bp 62.82 26.34 86.90
qh_2_scaffold_10000
Species: Natrialba hulunbeirensis (100%)
1 1861 bp 59.81 16.60 99.95
qh_2_scaffold_10001
Order: Halobacteriales (66.67%)
3 2716 bp 73.56 53.65 98.20
qh_2_scaffold_10002
Order: Haloferacales (100%)
3 3399 bp 62.96 8.03 79.96
qh_2_scaffold_10003 4 1861 bp 54.92 7.79 40.14
qh_2_scaffold_10005
Species: Halorhabdus utahensis (50%)
2 1861 bp 55.67 17.46 86.89
qh_2_scaffold_10006 3 1861 bp 55.72 6.13 82.05
qh_2_scaffold_10007 2 1861 bp 55.67 6.02 94.30
qh_2_scaffold_10008
Species: Natronomonas moolapensis (50%)
2 1861 bp 71.04 26.49 94.14
qh_2_scaffold_10009
Class: Halobacteria (50%)
8 3612 bp 52.88 8.83 81.15
qh_2_scaffold_10010
Domain: Bacteria (66.67%)
3 2448 bp 54.21 35.25 62.25
qh_2_scaffold_10012
Species: RBG_16_Gemmatimonadetes_66_8_curated (50%)
2 1860 bp 66.77 12.15 96.94
qh_2_scaffold_10015
Species: Pseudomonas entomophila (100%)
1 1860 bp 57.90 6.77 99.84
qh_2_scaffold_10016
Genus: Natronomonas (66.67%)
3 2448 bp 66.30 23.08 88.24
qh_2_scaffold_10018
Order: Halobacteriales (50%)
4 1859 bp 70.95 23.02 69.39
qh_2_scaffold_10019
Species: Halogranum salarium (100%)
1 1859 bp 59.60 7.91 54.87
qh_2_scaffold_10020
Order: Natrialbales (60%)
5 3744 bp 68.62 12.02 91.59
qh_2_scaffold_10021
Order: Bacteroidetes Order II. Incertae sedis (50%)
4 3221 bp 63.37 24.62 74.51
qh_2_scaffold_10022
Species: Albugo candida (50%)
2 1859 bp 50.40 6.51 64.55
qh_2_scaffold_10024
Order: Halobacteriales (75%)
4 3454 bp 62.19 10.54 55.76
qh_2_scaffold_10025
Species: Tolypothrix sp. PCC 7601 (66.67%)
3 3421 bp 56.33 8.62 96.73
qh_2_scaffold_10026
Species: Halosimplex carlsbadense (100%)
2 1858 bp 64.69 10.01 73.63
qh_2_scaffold_10027
Species: Salinibacter ruber (100%)
1 1858 bp 63.78 14.42 99.95
qh_2_scaffold_10029
Species: Caldilinea aerophila (50%)
2 2719 bp 68.04 24.05 78.23
qh_2_scaffold_10031
Species: halophilic archaeon DL31 (50%)
2 1857 bp 59.94 47.33 95.32
qh_2_scaffold_10032
Domain: Bacteria (100%)
3 1857 bp 48.52 5.17 88.85
qh_2_scaffold_10034
Species: Salinibacter ruber (50%)
2 1857 bp 66.18 53.74 91.44
qh_2_scaffold_10035
Species: Halorhabdus utahensis (100%)
2 1857 bp 55.52 17.12 89.01
qh_2_scaffold_10036 3 2945 bp 69.92 69.61 94.23
qh_2_scaffold_10037
Species: Natronolimnobius innermongolicus (50%)
2 1857 bp 65.21 8.56 100.32
qh_2_scaffold_10038
Species: Halorubrum distributum (50%)
2 2348 bp 70.57 10.86 84.45
qh_2_scaffold_10039
Species: Haloquadratum sp. J07HQX50 (50%)
2 1856 bp 52.42 15.79 60.78
qh_2_scaffold_1004 10 8984 bp 61.93 10.37 80.28
qh_2_scaffold_10040
Species: Rhodothermus marinus (50%)
2 2475 bp 54.83 6.83 83.27
qh_2_scaffold_10041
Species: Haladaptatus paucihalophilus (50%)
4 2963 bp 64.83 10.12 84.04
qh_2_scaffold_10043 2 1856 bp 54.47 7.49 56.90
qh_2_scaffold_10044
Domain: Bacteria (100%)
3 1856 bp 58.46 15.09 100.38
qh_2_scaffold_10045
Species: Desulfobacter postgatei (50%)
2 1856 bp 60.24 58.78 70.96
qh_2_scaffold_10046
Species: Natronomonas pharaonis (50%)
2 1856 bp 70.58 32.65 96.82
qh_2_scaffold_10047
Species: Halorhabdus utahensis (75%)
4 2707 bp 63.95 28.04 81.94
qh_2_scaffold_10048 2 1856 bp 54.15 6.41 70.47
qh_2_scaffold_10050
Species: Natronomonas pharaonis (100%)
1 1856 bp 68.53 67.19 89.87
qh_2_scaffold_10051
Species: Halorubrum hochstenium (50%)
2 1855 bp 67.17 59.08 84.58
qh_2_scaffold_10052
Species: Candidatus Entotheonella sp. TSY2 (50%)
2 1855 bp 67.76 14.61 74.23
qh_2_scaffold_10053
Species: Natronorubrum bangense (50%)
2 1855 bp 58.01 34.29 74.07
qh_2_scaffold_10054
Class: Halobacteria (66.67%)
3 2408 bp 71.30 23.05 92.44
qh_2_scaffold_10055
Species: Rhodothermus marinus (100%)
2 1855 bp 64.85 14.50 95.58
qh_2_scaffold_10056
Species: Blastocystis hominis (50%)
2 1855 bp 52.88 6.90 86.36
qh_2_scaffold_10057
Species: Halosimplex carlsbadense (100%)
3 1855 bp 68.25 21.51 78.11
qh_2_scaffold_10060
Species: Salisaeta longa (50%)
2 1855 bp 60.11 62.16 81.35
Displaying items 1-50 of 21073 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.