ggKbase home page

qh_2_scaffold_426_8

Organism: QH_2_Salinibacter_ruber_64_26

near complete RP 40 / 55 MC: 3 BSCG 41 / 51 MC: 3 ASCG 7 / 38
Location: comp(8978..9532)

Top 3 Functional Annotations

Value Algorithm Source
rpoD; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 184.0
  • Bit_score: 332
  • Evalue 7.30e-89
rpoD; RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24658079 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 185.0
  • Bit_score: 332
  • Evalue 2.60e-88
RNA polymerase sigma factor {ECO:0000313|EMBL:CBH25282.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 184.0
  • Bit_score: 332
  • Evalue 3.60e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 555
ATGCCTGAGCCTGCCTTCGACCCCAACCGCGTCCGTGCGGCCCAGGACGGTGACGAAGAGGCACGAAACGGACTGCTCCGCCGCCTGGAGCCCATCCTGCGGGGCTACTTCATCAAGCGCATTGGCGGAGAAACCGACGTCGACGATTTGGTCCAGAATACACTGGTGCGCGTCCACGAGAGCCTCGATGATCTCGAAAAGCCGGGCAGTCTCAAGTCGTTTGCCATGAAGGCCGCCCTCTTTGAACTGCAGGACTACTACCGGGGGCGCTACGACATGAAGGAGACCCTTCAGGACCCCGACCTGCCTCTCGGCCGCACCACAGACCCTGAGGATCGGAGTGCACACGTGGACGTGGAAAAAGCCCTGGAAGCCCTCACCCCGAAGGCGCGGCGCATCATGGAGCTTCGGGAGTATGGCTATCTGTACCGCGAGATTGCGCAGATGCTCGACACCACGGAGGCGGCGGTGAAAATGCAGGTGAAACGGGCCTTCGAGACCATGAATGACGCACTGAGTGCACTGCTGATCTTGCTCTGGTTCTTGGGGCTGTGA
PROTEIN sequence
Length: 185
MPEPAFDPNRVRAAQDGDEEARNGLLRRLEPILRGYFIKRIGGETDVDDLVQNTLVRVHESLDDLEKPGSLKSFAMKAALFELQDYYRGRYDMKETLQDPDLPLGRTTDPEDRSAHVDVEKALEALTPKARRIMELREYGYLYREIAQMLDTTEAAVKMQVKRAFETMNDALSALLILLWFLGL*