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qh_2_scaffold_2050_5

Organism: QH_2_Bacteroidetes_Order_II__Incertae_sedis_67_10

partial RP 35 / 55 BSCG 38 / 51 MC: 1 ASCG 5 / 38
Location: 3548..6925

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=309807 species="Bacteria; Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 999.99
  • Bit_score: 1289
  • Evalue 0.0
transcription-repair coupling factor n=1 Tax=Salisaeta longa RepID=UPI0003B5D585 similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 999.99
  • Bit_score: 1294
  • Evalue 0.0
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 999.99
  • Bit_score: 1289
  • Evalue 0.0

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3378
GTGGCTCTCCAGGACATCTACCGCCGCGTCGCCGGCGCCGCGCTCGCGAGCGAACTGCGCGACTGGCGCACCGGCGCGGCTCCGGGTGACGCGCTCCGCATCGCCGGCGCCGCCGGCTCGCTGCCGGCCTTTTTGCTGCGTGCGCTCTTGGACGAAGACGGGCCCAGTGGCAACGGCCAGCCCGTGCCCCTCCTCGCCGTCGCGCCCGACGAAGACGCCGCCGCCTACCTGCGGAGCGACCTCGACGCCCTGCTCGGCGAGAAAAGCGCCGCCGCGGTCCTCCACTTTCCCGCCACCGGACAGACGCCCTACGACGACGAGCAAATCGCCTCCTCCGCCCCGCTGACGGCCCGCGCCGACGTGCTCCAGCAGCTCACCGGGGGCTTCGGCGGGATCGTCGTCACCAGCGCGGAGGCCCTCTTCGAAAAAGTGCCCCCGCCCGAGGGCGTCCAGCAGGACACCCTGCGCATCGAGCGCGGCCAGACGCTCGCGCCGGAGCGACTGGTCGACCGGCTCAACGGGCAGGGCTTCTCGCGGGTCGAGTTCGTCGAGGAACCCGGCCACCTCGCGCGGCGCGGCGGCATCCTCGACGTGTTTCCCTTCTCTGGCGAGTACCCGGTGCGCATCGAGTTCTTCGGCGACGAAATCGACGGCCTCCGCGAGTTCGACCCGCACACGCAGCGCAGCGTCAGCCGCCTGACCGAGACGCGCCTCGTGCCAAACCTGGAGCGCGAGGATGAGGAGGGCGAAAGCGGTCCGCGCGTCCCGTTTTTCGACTACCTGCCCGACGCCGCCCTCGCGGCCACCTTCGACGAGGAGCGCCTGCTCGAAGAGACCGCTGAGCGCTTCGCCGACGCCGAGAAGCGCCACGCGGAGGCGCTGGGCGAACGCGAGAACGGCGGCGAGCCGCTGCCCGCTCCCGAGGCGCGCTATTTGCCCGCTGACGCGCTCCAGACGCAGATCGAGCGCCCCCCGCGCCTGCTCTTCGGCACCTTTACCGGCGATGTAGAAGCGGAGACGCTCGAAGCAAATGCCCACTCGCAGCCCGCCTTCGGGCGCAGCATCGAGCACGTCAGCGCGAAGCTGACCGAGAACGACAACAAGGGCTGGCAAAACTTCCTGCTGTGCGACAGTCAGGGGCAGGTCACGCGCCTGCGCGAGCTGTTGGAGGGCGACGTGGACGCCGGACGGGCGCGCATCACCGCCGAGGCGAGCCTGCACGAAGGCTTCGAGCTGCCGAGCGCCGAGCTGGCCGTTTATACCGACCATCAGATCTTCGGGCGCCACCACCGTCCCTCCACCCAGAAGAGCCAGCCGACCGCCGGCGGCCTCTCGCTGCGCGACATTCAGAACCTCACGCCGGGCGACTTCGTGGTGCACGTCGATTACGGCATCGGCAAGTTCGCGGGCCTGCGCGAGATCACCGTGCGCGAAAAGAAGCAGGAAGCCGTGCGCCTGCGGTTTCGGAACGAAGACACGCTCTTCGTCAACACCAGCGCGCTGCACAAGCTCAGCAAGTACAAGAGCGAGGAGGGCCACCAGCCGCGCCTGACGAACCTGAACTCCGACCAGTGGGCAAAGAAGAAGGCCAAGACGAAGGGGCAGGTCAAGGACATCGCCCGCGACCTGATCGAGCTGTATGCGAAAAGAAAGGCTGCCACGGGCCACGCCTTCCAGAAAGACACCGTCTGGCAGCGCGAGATGGAGGCCTCCTTCGCCTTCGAGGACACGCCCGACCAGGCGAAAGCCACGCGCGAGGTCAAGGAAGACATGGAGGCGCGCTCGCCGATGGACCGGCTCGTCTGCGGCGACGTGGGCTTCGGCAAGACCGAGGTGGCCGTGCGCGCCGCCTTCAAGGCCGTGCAGGACGGCAAGCAGGTGGCCGTCCTCGTGCCCACAACGGTCCTCGCCCAGCAGCACGGCACCACCTTCAGCGAGCGCCTCGAGCCGTACCCGGTGCGCGTCGAATCGCTCTCGCGCTTCCGCTCGACCGCAGAGCAGCGCGAGGTAGTGGCGGGGCTGGAAAATGGCGCCGTGGACGTGGTGATCGGCACGCACCGGCTCACCTCCAACGACGTGAAGTTCGACGACCTGGGGCTCGTCGTGATCGACGAGGAGCAGCGCTTCGGCGTCAAGACCAAAGAGCGCCTGCGCGAGATGCGCGCCTCGGTGGACACGCTGACCCTGACGGCCACGCCCATTCCGCGCACGCTTCAGTTTTCGCTCCTCGGCGCGCGCGACCTCTCGATCATCGGCACGCCGCCGCCGAACCGCCAGCCCATCGTCACCGAGATCCACGGCTTCGACAAGGCGCTGATCCGCGACGCCATTCAGTACGAAAAGAGCCGCGGCGGACAGGTCTTCTTCATCCACAACCGCGTCAAAAGCATCCGCGAGGTCGCCGAGATGGTGCGCGCCATCGCCCCGAACACGCGGGTCAAAATCGGCCACGGGCAGATGCCGCCCAACGAACTGGAGGACGTGATGCTCGGCTTCATCGAAAAGGAGTTCGACGTGCTCGTCAGCACCACGATCATCGAGAACGGCCTCGACATCTCCAACGCCAACACGATGATCCTCAACCGCGCCGACCGCTTTGGCCTCTCGGAGATGCACCAGCTGAGAGGCCGCGTGGGGCGGAGCGAGCGCAAGGCGTTCTGCTACCTCCTGGTGCCGTCGGTGGGCGGGCTGACGAAGGACGCGCGGCAACGCCTGAAGGCCGTCGAGGAGTTTTCGGAGCTGGGGAGCGGCTTTTCGCTGGCGATGCGCGACCTCGACATTCGCGGCGCGGGGAGCCTGCTGGGCTCCGAGCAGAGCGGCTTCATCAACGACGTGGGCTACGAGACCTACCAGCGCATCCTCAGCGAAGCGGTGCAGGAGTTGCGCGCCGGGGAATTCAGCGAGACCTTCGAGGACGGCGAGGAGGCCGCCCTCCCGCCCGCGCCGGACACCGCCGTAGACGTGGAGGCCGACGCGCTTTTGCCGAAGGACTACGTCTCGAACAACACCGAGCGGCTCAACCTGTACCGCCGCATCAGCGACGCGACCGACGCCGAGACGCTCACGGCCCTACGCGAGGAGCTGGAGGACCGCTTCGGCCCGGTTCCGCCGGAGGGCGAGCAGCTCCTCGAAGCCCACGCTGGATCGGCGCTACGTGATGAAAGACCCCGCCGACGGCACCACGCGCGCGATCGTGCAGGACGTGCCGTCGCTGGAAGAGGCGACGTTCGTGGCCGAGTGGCTGGCGACGCCCGCGGAGGACGAGGCGGCGGCCGAAGCCGAGACGGTGGCGAGTGTCGAGGCATGATTCGATTCGGGCACGCAGTTATCGGATTCTACCAAGAAGATTCCTCCTCTAGATCTGGAAGCCAAGTATAA
PROTEIN sequence
Length: 1126
VALQDIYRRVAGAALASELRDWRTGAAPGDALRIAGAAGSLPAFLLRALLDEDGPSGNGQPVPLLAVAPDEDAAAYLRSDLDALLGEKSAAAVLHFPATGQTPYDDEQIASSAPLTARADVLQQLTGGFGGIVVTSAEALFEKVPPPEGVQQDTLRIERGQTLAPERLVDRLNGQGFSRVEFVEEPGHLARRGGILDVFPFSGEYPVRIEFFGDEIDGLREFDPHTQRSVSRLTETRLVPNLEREDEEGESGPRVPFFDYLPDAALAATFDEERLLEETAERFADAEKRHAEALGERENGGEPLPAPEARYLPADALQTQIERPPRLLFGTFTGDVEAETLEANAHSQPAFGRSIEHVSAKLTENDNKGWQNFLLCDSQGQVTRLRELLEGDVDAGRARITAEASLHEGFELPSAELAVYTDHQIFGRHHRPSTQKSQPTAGGLSLRDIQNLTPGDFVVHVDYGIGKFAGLREITVREKKQEAVRLRFRNEDTLFVNTSALHKLSKYKSEEGHQPRLTNLNSDQWAKKKAKTKGQVKDIARDLIELYAKRKAATGHAFQKDTVWQREMEASFAFEDTPDQAKATREVKEDMEARSPMDRLVCGDVGFGKTEVAVRAAFKAVQDGKQVAVLVPTTVLAQQHGTTFSERLEPYPVRVESLSRFRSTAEQREVVAGLENGAVDVVIGTHRLTSNDVKFDDLGLVVIDEEQRFGVKTKERLREMRASVDTLTLTATPIPRTLQFSLLGARDLSIIGTPPPNRQPIVTEIHGFDKALIRDAIQYEKSRGGQVFFIHNRVKSIREVAEMVRAIAPNTRVKIGHGQMPPNELEDVMLGFIEKEFDVLVSTTIIENGLDISNANTMILNRADRFGLSEMHQLRGRVGRSERKAFCYLLVPSVGGLTKDARQRLKAVEEFSELGSGFSLAMRDLDIRGAGSLLGSEQSGFINDVGYETYQRILSEAVQELRAGEFSETFEDGEEAALPPAPDTAVDVEADALLPKDYVSNNTERLNLYRRISDATDAETLTALREELEDRFGPVPPEGEQLLEAHAGSALRDERPRRRHHARDRAGRAVAGRGDVRGRVAGDARGGRGGGRSRDGGECRGMIRFGHAVIGFYQEDSSSRSGSQV*