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qh_2_scaffold_1115_1

Organism: QH_2_Salinibacter_ruber_62_9

partial RP 39 / 55 BSCG 34 / 51 ASCG 4 / 38
Location: comp(3..230)

Top 3 Functional Annotations

Value Algorithm Source
rpoD; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 76.0
  • Bit_score: 118
  • Evalue 9.00e-25
rpoD; RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24658079 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 76.0
  • Bit_score: 118
  • Evalue 3.20e-24
RNA polymerase sigma factor {ECO:0000313|EMBL:CBH25282.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 76.0
  • Bit_score: 118
  • Evalue 4.50e-24

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 228
ATGGCTGACGCTTCCTTCGACCCCGCCCAGGTTCGTCGTGCCCAGGACGGCGACGACCAGGCCTGGAACGACCTTCTCCGTCGTCTTGAGCCCATCCTCCGGGGCTACTTCATCAAACGCATCGGGAAGGAGGCGGGCGTCGATGACCTCGTCCAGAATACCCTGATGCGGGTGCATGAGGGATTGGAGGACTTGAAGAAGCCCGGCAGCCTCAAGTCGTTTGCCATG
PROTEIN sequence
Length: 76
MADASFDPAQVRRAQDGDDQAWNDLLRRLEPILRGYFIKRIGKEAGVDDLVQNTLMRVHEGLEDLKKPGSLKSFAM