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QH_2_Parcubacteria_50_6

In projects: QH_2  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: Parcubacteria  →  Bacteria

Taxonomy override: Parcubacteria

Metagenomic Context

Parent: QH_2_UNK

Properties

Avg. coverage: 6.26 Longest contig: 5.87 Kbp Bin length: 407.06 Kbp GC content: 49.70 %
Contigs count: 235 Features count: 586 rRNAs count: 0 tRNAs count: 8

Genome completeness

partial RP 29 / 55 MC: 6 BSCG 30 / 51 MC: 8 ASCG 7 / 38 MC: 3
Displaying items 101-150 of 235 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_2_scaffold_15799
Species: R_RIF_OD1_10_46_25 (50%)
2 1368 bp 47.81 5.56 101.32
qh_2_scaffold_14710
Species: RHI_OD1_Magasanikbacteria_41_16 (50%)
2 1435 bp 38.68 4.11 74.22
qh_2_scaffold_48089
Species: R_OD1_Adlerbacteria_52_17 (50%)
2 1175 bp 51.74 5.11 61.28
qh_2_scaffold_18459
Species: R_RIF_OD1_10_39_10 (50%)
2 1224 bp 51.63 4.98 98.04
qh_2_scaffold_31272
Species: GWE1_OD1_40_20 (50%)
2 1389 bp 46.65 7.06 73.65
qh_2_scaffold_13017
Species: Parcubacteria bacterium RAAC4_OD1_1 (50%)
2 2248 bp 38.88 6.01 55.52
qh_2_scaffold_23616
Species: R_OD1_Yanofskybacteria_39_8b (50%)
2 1730 bp 55.20 7.17 95.55
qh_2_scaffold_20563
Species: R_RIF_OD1_12_48_26 (50%)
2 1132 bp 47.44 6.27 99.38
qh_2_scaffold_15185
Species: R_RIF_OD1_11_47_18 (50%)
2 1405 bp 48.40 6.69 92.67
qh_2_scaffold_37843
Species: Parcubacteria bacterium GW2011_GWC1_40_11 (50%)
2 1423 bp 39.63 7.17 53.97
qh_2_scaffold_15812
Species: GWA2_OD1_50_10_part (50%)
2 1367 bp 44.40 7.97 61.23
qh_2_scaffold_24086
Species: GWC1_OD1_42_11 (50%)
2 1009 bp 56.10 6.05 100.20
qh_2_scaffold_10262
Species: R_RIF_OD1_11_46_13 (50%)
2 1832 bp 56.55 5.62 77.95
qh_2_scaffold_7342
Species: R_RIF_OD1_07_45_25 (50%)
2 2253 bp 41.77 7.32 77.36
qh_2_scaffold_36475
Species: Parcubacteria bacterium GW2011_GWA2_47_64 (50%)
2 1359 bp 56.29 5.30 81.90
qh_2_scaffold_17957
Species: R_OD1_52_25 (50%)
2 1249 bp 49.56 5.76 57.17
qh_2_scaffold_17268
Species: RLO_RIF_OD1_11_43_20 (50%)
2 1285 bp 47.55 6.61 91.98
qh_2_scaffold_19588
Species: R_OD1_Moranbacteria_54_31 (50%)
2 1172 bp 52.13 5.63 73.98
qh_2_scaffold_22028
Species: R_OD1_47_10b (50%)
2 1076 bp 52.23 5.95 61.90
qh_2_scaffold_11662
Species: CG_Nomura_04 (50%)
2 2216 bp 50.32 7.76 68.50
qh_2_scaffold_20352
Species: R_RIF_OD1_04_46_36 (50%)
2 1141 bp 50.92 7.19 82.82
qh_2_scaffold_14748
Species: R_OD1_Nomurabacteria_39_9 (50%)
2 1433 bp 44.38 6.70 41.24
qh_2_scaffold_16484
Species: RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated (50%)
2 1328 bp 55.80 5.27 98.72
qh_2_scaffold_13661
Species: GWA2_OD1_47_12 (50%)
2 1516 bp 43.73 7.59 68.67
qh_2_scaffold_27280
Species: GWA1_OD1_51_14_curated (100%)
2 1506 bp 54.58 6.31 94.82
qh_2_scaffold_20595
Species: CG_Nomura_04 (100%)
2 1859 bp 53.42 5.86 85.05
qh_2_scaffold_19151
Species: RIFOXYD1_FULL_OD1_Kaiserbacteria_47_14_curated (50%)
2 1192 bp 46.73 5.87 92.87
qh_2_scaffold_8062
Species: R_OD1_Uhrbacteria_47_25 (50%)
2 2125 bp 47.25 5.65 74.96
qh_2_scaffold_19846
Species: R_RIF_OD1_05_46_10 (50%)
2 1161 bp 51.77 6.03 93.28
qh_2_scaffold_32743
Species: RIFOXYC1_FULL_RIF_OD1_09_52_10_curated (50%)
2 1531 bp 53.36 6.86 61.14
qh_2_scaffold_15628
Species: Parcubacteria bacterium GW2011_GWA2_47_16 (50%)
2 1379 bp 48.51 5.95 81.80
qh_2_scaffold_22289
Species: GWC1_OD1_38_22 (50%)
2 1068 bp 55.62 6.74 71.91
qh_2_scaffold_24131
Species: RHI_RIF_OD1_10_43_12b (50%)
2 1007 bp 52.23 5.16 98.61
qh_2_scaffold_13535
Species: Parcubacteria bacterium GW2011_GWA2_39_18 (50%)
2 1525 bp 46.62 6.95 89.90
qh_2_scaffold_17773
Species: RHI_RIF_OD1_10_44_12b (50%)
2 1259 bp 52.18 6.35 83.64
qh_2_scaffold_5328
Species: R_OD1_45_15 (50%)
2 2731 bp 49.87 6.99 74.04
qh_2_scaffold_17784
Species: R_RIF_OD1_10_39_26 (50%)
2 1258 bp 54.13 5.88 98.73
qh_2_scaffold_23458
Species: Parcubacteria bacterium GW2011_GWC2_42_11 (50%)
2 1028 bp 52.14 9.53 99.51
qh_2_scaffold_16989
Species: RIFOXYD1_FULL_RIF_OD1_10_39_35_curated (50%)
2 1299 bp 45.34 5.70 99.31
qh_2_scaffold_13093
Species: GWC2_OD1_38_7 (50%)
2 1559 bp 39.64 5.13 98.52
qh_2_scaffold_12864
Species: R_OD1_Yanofskybacteria_41_21 (50%)
2 1578 bp 47.02 6.21 99.62
qh_2_scaffold_22080
Species: GWA1_OD1_40_21 (50%)
2 1670 bp 52.57 5.33 95.93
qh_2_scaffold_24157
Species: RLO_RIF_OD1_11_43_20 (50%)
2 1640 bp 49.76 7.20 36.59
qh_2_scaffold_24507
Species: Parcubacteria bacterium GW2011_GWA2_47_16 (50%)
2 2011 bp 50.72 6.66 85.63
qh_2_scaffold_6953
Species: R_OD1_46_25 (100%)
2 2336 bp 52.70 7.79 75.00
qh_2_scaffold_9905
Species: RLO_OD1_Kaiserbacteria_45_26 (50%)
2 1870 bp 54.28 6.42 92.73
qh_2_scaffold_15428
Species: RBG_13_OD1_Moranbacteria_45_13_curated (50%)
2 1390 bp 53.60 5.68 94.53
qh_2_scaffold_21861
Species: GWA2_OD1_56_11 (50%)
2 1082 bp 53.97 6.65 62.94
qh_2_scaffold_22783
Species: RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated (50%)
2 1051 bp 50.81 5.90 72.50
qh_2_scaffold_23944
Species: R_OD1_Yanofskybacteria_44_12 (50%)
2 1898 bp 52.48 9.11 101.48
Displaying items 101-150 of 235 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.