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qh_3_scaffold_114_26

Organism: QH_3_Oscillatoriophycideae_48_40

near complete RP 49 / 55 MC: 3 BSCG 49 / 51 MC: 1 ASCG 11 / 38
Location: 26044..26835

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase specialized sigma subunit n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DH40_9CHRO similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 253.0
  • Bit_score: 396
  • Evalue 2.70e-107
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=582515 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Rubidibacter.;" source="Rubidibacter lacunae KORDI 51- similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 253.0
  • Bit_score: 396
  • Evalue 3.80e-107
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 251.0
  • Bit_score: 382
  • Evalue 1.20e-103

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Taxonomy

Rubidibacter lacunae → Rubidibacter → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGCCGACTCTAGCCACTGAGGAACTAAAAGTCACTGAGGAACTGAAGCGTCGGAGCTTGCGATTGTTGAGAGAATACCAGCAATCTCAGGATGCTGAACTACGCAATCAACTCGTAAAACTCAACTTCGGATTGGTTAGGAAAGAGGCACACCACTGGGTCAATCAGTGTAGAGAAAGCTACGATGACTTGTTGCAAGTGGGCTGTCTTGGCTTAATCCGAGCAATTGAACGATTCGATCTGTCCAAAGGATACGCTTTTAGTTCTTTTGCCATTCCCTATATTCGCGGTGAAATTCAACACTATTTACGCGATCGCGGTGCGAGCGTCCGAATTCCGCGACGCTGGCTAGAACTCCGACAACAAGCCAGAGGAGTGACGCGGAACTTACGAGAGGAGTTAAACCGACAACCAACTGATGCAGAGATAGCAGCAGCATTAAAGATTTCTTTGAAAGAATGGCAAGATATCAAGCTAGCTGCTCAAAATCAGGAACCTTTGAGCCTGGACATGCCTATGGGGAGTGAACAGGAAAGTACCACTAGCTTGGGAGAACTTGTCCCTGATCCTCGATATCGCACTTTTCAGTTGGCTCAAGAAGACCAACTTCGCCTGCAACAAGCGCTGATTGAGCTTGAAGACCGGACGCGCAGTGTTCTGGAATTTGTTTTCTTGCAAGATCTTACCCAAAAAGAAGTCGCTGAACTTTTAGGCATTAGTGTCGTGACTGTATCGCGCCGTCTAAAAAAAGGATTGGACTTGCTGAAGCGGTCAATGGCTACCGAAAGCTAA
PROTEIN sequence
Length: 264
MPTLATEELKVTEELKRRSLRLLREYQQSQDAELRNQLVKLNFGLVRKEAHHWVNQCRESYDDLLQVGCLGLIRAIERFDLSKGYAFSSFAIPYIRGEIQHYLRDRGASVRIPRRWLELRQQARGVTRNLREELNRQPTDAEIAAALKISLKEWQDIKLAAQNQEPLSLDMPMGSEQESTTSLGELVPDPRYRTFQLAQEDQLRLQQALIELEDRTRSVLEFVFLQDLTQKEVAELLGISVVTVSRRLKKGLDLLKRSMATES*