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QH_6_UNK

In projects: QH_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.84 Longest contig: 86.52 Kbp Bin length: 43.49 Mbp GC content: 61.40 %
Contigs count: 17572 Features count: 56719 rRNAs count: 11 tRNAs count: 537

Genome completeness

megabin RP 45 / 55 MC: 35 BSCG 42 / 51 MC: 35 ASCG 38 / 38 MC: 38
Displaying items 17351-17400 of 17572 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_6_scaffold_22430
Species: Desulfobacula toluolica (50%)
2 1011 bp 47.68 4.95 100.30
qh_6_scaffold_9246
Species: Methanobacterium formicicum (50%)
2 1939 bp 40.95 4.95 100.10
qh_6_scaffold_14479
Species: Desulfobulbus sp. Tol-SR (100%)
1 1436 bp 55.78 4.94 99.86
qh_6_scaffold_21879
Species: Halorhabdus tiamatea (100%)
1 1035 bp 42.22 4.93 93.91
qh_6_scaffold_14393
Domain: Metazoa (66.67%)
3 2252 bp 53.42 4.93 53.69
qh_6_scaffold_13841 2 1484 bp 56.94 4.92 95.42
qh_6_scaffold_17559
Domain: Bacteria (66.67%)
3 1240 bp 50.40 4.92 93.63
qh_6_scaffold_22262 1 1018 bp 49.80 4.91 42.44
qh_6_scaffold_21814
Species: Pseudoalteromonas marina (50%)
2 1038 bp 36.71 4.91 100.00
qh_6_scaffold_14284 4 2584 bp 49.15 4.91 55.61
qh_6_scaffold_18676
Species: Halococcus morrhuae (100%)
1 1181 bp 56.22 4.91 97.80
qh_6_scaffold_21776 2 1039 bp 39.27 4.91 55.44
qh_6_scaffold_14029
Species: Halorubrum lipolyticum (100%)
2 1469 bp 52.42 4.90 100.07
qh_6_scaffold_20293 1 1102 bp 60.16 4.90 99.64
qh_6_scaffold_20788
Species: Salinibacter ruber (50%)
2 2203 bp 50.25 4.90 63.19
qh_6_scaffold_9714 3 1880 bp 39.41 4.89 41.91
qh_6_scaffold_15450 1 1369 bp 51.86 4.89 62.89
qh_6_scaffold_18983 1 1165 bp 52.96 4.89 99.91
qh_6_scaffold_18114
Species: BJP_IG2157_Anaerolineales_55_23 (100%)
1 1209 bp 40.03 4.88 97.02
qh_6_scaffold_14501
Species: Acinetobacter baumannii (50%)
2 1435 bp 42.44 4.88 99.93
qh_6_scaffold_18917
Species: Halopiger xanaduensis (100%)
2 1168 bp 46.15 4.88 99.91
qh_6_scaffold_12885 1 1562 bp 59.41 4.87 99.87
qh_6_scaffold_26343
Species: R_OD1_Moranbacteria_54_31 (50%)
2 2341 bp 36.74 4.87 92.14
qh_6_scaffold_21548
Species: Haloarcula sinaiiensis (100%)
1 1048 bp 51.24 4.87 70.71
qh_6_scaffold_25006
Species: Rhodothermus marinus (100%)
1 1624 bp 61.08 4.86 44.15
qh_6_scaffold_20075
Species: Halovirus HCTV-2 (50%)
2 1112 bp 64.30 4.86 40.47
qh_6_scaffold_11102
Species: Halogeometricum borinquense (50%)
2 1728 bp 55.03 4.86 59.38
qh_6_scaffold_13886 2 1480 bp 57.30 4.86 40.34
qh_6_scaffold_22020
Species: Pedosphaera parvula (100%)
1 1028 bp 60.99 4.86 99.81
qh_6_scaffold_38073 1 1195 bp 43.85 4.85 99.67
qh_6_scaffold_29068 2 1446 bp 61.13 4.84 80.91
qh_6_scaffold_20909 1 1074 bp 41.25 4.84 27.93
qh_6_scaffold_11030
Species: Halorubrum aidingense (50%)
2 1735 bp 41.21 4.84 79.19
qh_6_scaffold_19122
Species: CG_Micra_06 (50%)
2 1158 bp 38.51 4.84 96.37
qh_6_scaffold_16899
Species: Synechococcus sp. PCC 6312 (50%)
2 1281 bp 46.45 4.84 88.99
qh_6_scaffold_15543
Species: Halomicrobium mukohataei (50%)
2 1363 bp 55.98 4.84 87.38
qh_6_scaffold_13993 3 1471 bp 46.30 4.83 83.82
qh_6_scaffold_19545
Species: Halalkalicoccus jeotgali (50%)
2 1138 bp 45.87 4.83 83.04
qh_6_scaffold_22333
Species: Salinibacter ruber (50%)
2 1015 bp 43.05 4.83 80.10
qh_6_scaffold_18715 3 1179 bp 51.65 4.83 84.73
qh_6_scaffold_19887
Species: Natrialba asiatica (50%)
2 1121 bp 50.76 4.82 100.09
qh_6_scaffold_14197
Species: Haloferax sulfurifontis (50%)
2 1456 bp 52.47 4.81 85.92
qh_6_scaffold_19429 2 1143 bp 41.91 4.81 96.33
qh_6_scaffold_21739
Order: Haloferacales (66.67%)
3 1040 bp 48.65 4.81 92.60
qh_6_scaffold_20682
Class: Halobacteria (66.67%)
3 1084 bp 61.72 4.80 100.18
qh_6_scaffold_17039
Species: Haloarcula argentinensis (50%)
2 1272 bp 49.76 4.80 85.61
qh_6_scaffold_19320 2 1148 bp 39.29 4.79 39.98
qh_6_scaffold_8485 1 2044 bp 42.42 4.79 65.31
qh_6_scaffold_18899 2 1169 bp 47.13 4.79 61.85
qh_6_scaffold_21693 2 1043 bp 51.58 4.79 43.43
Displaying items 17351-17400 of 17572 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.