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QH_6_UNK

In projects: QH_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.84 Longest contig: 86.52 Kbp Bin length: 43.49 Mbp GC content: 61.40 %
Contigs count: 17572 Features count: 56719 rRNAs count: 11 tRNAs count: 537

Genome completeness

megabin RP 45 / 55 MC: 35 BSCG 42 / 51 MC: 35 ASCG 38 / 38 MC: 38
Displaying items 251-300 of 17572 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_6_scaffold_8895
Species: Halosimplex carlsbadense (100%)
3 1990 bp 70.00 26.73 100.55
qh_6_scaffold_4092
Species: Candidatus Acetothermus autotrophicum (50%)
2 3103 bp 66.87 35.93 100.55
qh_6_scaffold_14039
Species: Natronomonas moolapensis (50%)
2 1468 bp 72.48 41.28 100.55
qh_6_scaffold_20238
Species: Natronomonas pharaonis (66.67%)
3 1104 bp 71.83 53.99 100.54
qh_6_scaffold_11688
Species: Natrialba taiwanensis (50%)
2 1671 bp 63.38 7.24 100.54
qh_6_scaffold_23877
Species: Natronomonas moolapensis (66.67%)
3 1492 bp 71.72 70.84 100.54
qh_6_scaffold_9778
Genus: Halorubrum (66.67%)
3 1871 bp 72.26 74.18 100.53
qh_6_scaffold_16283 3 1316 bp 56.76 6.38 100.53
qh_6_scaffold_17484
Species: Natronomonas moolapensis (66.67%)
3 2638 bp 67.13 78.92 100.53
qh_6_scaffold_19620
Species: Halococcus thailandensis (100%)
2 1134 bp 61.99 17.28 100.53
qh_6_scaffold_19507
Order: Halobacteriales (50%)
4 1140 bp 66.32 17.63 100.53
qh_6_scaffold_16062
Species: Halorubrum lipolyticum (50%)
2 1331 bp 71.75 42.82 100.53
qh_6_scaffold_19420
Species: Sorangium cellulosum (50%)
2 1143 bp 56.34 8.49 100.52
qh_6_scaffold_19355
Species: Haloferax sp. ATCC BAA-646 (66.67%)
3 1146 bp 60.30 6.63 100.52
qh_6_scaffold_10863
Order: Halobacteriales (66.67%)
3 1752 bp 66.61 12.27 100.51
qh_6_scaffold_11063
Species: Haloquadratum walsbyi (66.67%)
3 2776 bp 63.94 34.65 100.50
qh_6_scaffold_19139
Species: Natronomonas pharaonis (66.67%)
3 1985 bp 65.39 37.83 100.50
qh_6_scaffold_18418 3 1194 bp 54.77 7.96 100.50
qh_6_scaffold_18351
Species: Halosimplex carlsbadense (50%)
2 1197 bp 71.01 47.62 100.50
qh_6_scaffold_18214
Species: R_OP3X_51_18 (50%)
2 1203 bp 58.27 7.81 100.50
qh_6_scaffold_22556
Species: Nostoc sp. PCC 7524 (50%)
2 1006 bp 60.93 6.26 100.50
qh_6_scaffold_17734
Species: Natronorubrum bangense (100%)
2 1230 bp 70.08 20.89 100.49
qh_6_scaffold_9102 3 2666 bp 53.45 7.01 100.49
qh_6_scaffold_12005
Class: Halobacteria (66.67%)
3 1642 bp 59.56 70.89 100.49
qh_6_scaffold_7165
Order: Halobacteriales (66.67%)
3 2263 bp 71.14 47.02 100.49
qh_6_scaffold_17374
Species: Halosimplex carlsbadense (50%)
4 1251 bp 68.90 16.07 100.48
qh_6_scaffold_21415
Species: Saccharicrinis fermentans (50%)
2 1881 bp 62.15 6.70 100.48
qh_6_scaffold_17242
Species: Natronomonas pharaonis (66.67%)
3 1678 bp 72.65 19.55 100.48
qh_6_scaffold_17438
Species: Halobacterium sp. DL1 (50%)
2 1684 bp 64.79 15.14 100.48
qh_6_scaffold_6431
Species: halophilic archaeon J07HX64 (100%)
3 2404 bp 73.46 52.62 100.46
qh_6_scaffold_16217
Species: Natronomonas moolapensis (66.67%)
3 1320 bp 74.62 38.33 100.46
qh_6_scaffold_8864 3 3754 bp 52.45 5.94 100.45
qh_6_scaffold_20017
Species: Haloarcula marismortui (50%)
2 1114 bp 57.81 8.26 100.45
qh_6_scaffold_10422
Species: Chloroflexus aggregans (50%)
2 1798 bp 70.80 70.41 100.45
qh_6_scaffold_11505
Species: Natronomonas pharaonis (100%)
4 2748 bp 71.98 23.58 100.44
qh_6_scaffold_10021
Class: Halobacteria (100%)
3 1843 bp 73.63 75.37 100.43
qh_6_scaffold_12150
Species: Halococcus salifodinae (50%)
2 1628 bp 66.22 15.17 100.43
qh_6_scaffold_14799
Order: Natrialbales (66.67%)
3 1413 bp 72.12 12.24 100.43
qh_6_scaffold_14754
Order: Halobacteriales (66.67%)
3 1416 bp 74.72 12.36 100.42
qh_6_scaffold_3577
Species: Halopiger xanaduensis (75%)
4 3328 bp 57.57 14.21 100.42
qh_6_scaffold_21106
Species: Halonotius sp. J07HN6 (50%)
2 1667 bp 71.99 82.66 100.42
qh_6_scaffold_25612
Species: halophilic archaeon J07HB67 (66.67%)
3 1673 bp 66.53 44.83 100.42
qh_6_scaffold_2104 6 4395 bp 45.01 8.44 100.41
qh_6_scaffold_14049
Species: Halomicrobium mukohataei (50%)
2 1467 bp 68.30 10.16 100.41
qh_6_scaffold_27486
Species: Haloterrigena thermotolerans (100%)
2 1473 bp 52.21 6.04 100.41
qh_6_scaffold_3332 3 3457 bp 69.68 12.00 100.41
qh_6_scaffold_8980
Species: Halococcus saccharolyticus (66.67%)
3 1978 bp 46.51 5.66 100.40
qh_6_scaffold_22658
Species: Salinibacter ruber (100%)
2 1001 bp 67.43 25.27 100.40
qh_6_scaffold_22593
Order: Halobacteriales (60%)
5 1004 bp 65.24 12.25 100.40
qh_6_scaffold_22383
Species: Haloferax mucosum (50%)
2 1013 bp 58.24 81.24 100.40
Displaying items 251-300 of 17572 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.