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QH_6_Halobacteriales_70_45

In projects: QH_6  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: QH_6_UNK

Properties

Avg. coverage: 45.31 Longest contig: 13.35 Kbp Bin length: 2.17 Mbp GC content: 69.71 %
Contigs count: 506 Features count: 2634 rRNAs count: 0 tRNAs count: 18

Genome completeness

partial RP 12 / 55 MC: 4 BSCG 14 / 51 MC: 5 ASCG 24 / 38 MC: 6
Displaying items 101-150 of 506 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_6_scaffold_3168
Genus: Natronomonas (50%)
6 3540 bp 70.20 34.24 91.69
qh_6_scaffold_4160
Species: Natronomonas pharaonis (80%)
5 3079 bp 67.72 54.04 91.69
qh_6_scaffold_2027
Class: Halobacteria (85.71%)
7 4470 bp 70.51 30.27 91.54
qh_6_scaffold_1946
Order: Halobacteriales (60%)
5 4562 bp 68.15 17.78 91.54
qh_6_scaffold_8222
Species: Haloferax prahovense (50%)
2 3099 bp 71.89 67.12 91.48
qh_6_scaffold_3269
Species: halophilic archaeon DL31 (50%)
2 3484 bp 72.62 55.65 91.36
qh_6_scaffold_10829
Genus: Natronomonas (57.14%)
7 3363 bp 69.49 89.62 91.23
qh_6_scaffold_2309
Order: Halobacteriales (50%)
6 4748 bp 70.56 42.94 91.05
qh_6_scaffold_8695
Species: Natronomonas pharaonis (50%)
2 3092 bp 71.22 50.97 91.01
qh_6_scaffold_4535
Species: Natronomonas pharaonis (50%)
4 3851 bp 71.83 52.40 90.99
qh_6_scaffold_7747
Genus: Halobiforma (60%)
5 5210 bp 70.17 33.67 90.86
qh_6_scaffold_11325
Class: Halobacteria (80%)
5 3145 bp 70.14 34.34 90.81
qh_6_scaffold_6706
Class: Halobacteria (100%)
5 5792 bp 70.80 59.32 90.80
qh_6_scaffold_5404
Genus: Natronomonas (60%)
5 3813 bp 66.04 35.56 90.79
qh_6_scaffold_9149
Genus: Natronomonas (66.67%)
9 5144 bp 70.39 42.57 90.75
qh_6_scaffold_5518 3 3679 bp 69.09 13.07 90.68
qh_6_scaffold_3032
Class: Halobacteria (57.14%)
7 3625 bp 67.89 32.69 90.68
qh_6_scaffold_3919
Species: Candidatus Halobonum tyrrellensis (50%)
2 3172 bp 71.44 11.92 90.51
qh_6_scaffold_2446
Order: Natrialbales (75%)
4 4058 bp 68.80 45.17 90.49
qh_6_scaffold_2590
Species: Natronomonas pharaonis (100%)
4 3937 bp 70.03 46.66 90.37
qh_6_scaffold_8937
Order: Halobacteriales (55.56%)
9 5963 bp 72.68 56.55 90.26
qh_6_scaffold_3485
Order: Halobacteriales (50%)
6 3376 bp 63.86 38.89 90.20
qh_6_scaffold_2503
Species: Natronomonas moolapensis (50%)
6 4009 bp 68.17 36.39 90.17
qh_6_scaffold_8257
Species: Natronomonas pharaonis (71.43%)
7 3677 bp 70.03 48.71 90.16
qh_6_scaffold_2394
Genus: Haloferax (50%)
4 4098 bp 67.79 9.37 90.12
qh_6_scaffold_1649
Genus: Natrinema (57.14%)
7 4991 bp 69.73 44.10 90.10
qh_6_scaffold_379
Class: Halobacteria (100%)
10 11142 bp 71.25 45.30 90.01
qh_6_scaffold_5826
Species: Natronomonas pharaonis (50%)
6 3384 bp 69.53 62.41 89.98
qh_6_scaffold_8835
Order: Halobacteriales (80%)
5 3586 bp 70.97 66.20 89.93
qh_6_scaffold_8788
Species: Natronomonas moolapensis (50%)
4 3056 bp 71.99 69.90 89.92
qh_6_scaffold_4255
Species: Natronomonas moolapensis (50%)
6 3048 bp 70.44 36.04 89.86
qh_6_scaffold_8137
Class: Halobacteria (60%)
5 4347 bp 69.31 39.66 89.72
qh_6_scaffold_9592
Class: Halobacteria (66.67%)
3 3023 bp 69.24 39.04 89.71
qh_6_scaffold_7933
Genus: Natronomonas (57.14%)
7 4314 bp 71.37 68.96 89.71
qh_6_scaffold_3379
Genus: Natronomonas (60%)
5 4379 bp 69.56 43.46 89.68
qh_6_scaffold_4580 5 4245 bp 70.93 9.02 89.47
qh_6_scaffold_4512
Species: Natronomonas moolapensis (50%)
4 5592 bp 67.99 76.27 89.43
qh_6_scaffold_3543
Species: Haloarcula marismortui (50%)
2 3346 bp 70.68 22.98 89.30
qh_6_scaffold_5285
Species: Natronomonas pharaonis (50%)
6 3202 bp 68.33 53.12 89.29
qh_6_scaffold_3917
Genus: Natronomonas (50%)
4 4242 bp 68.55 40.08 89.25
qh_6_scaffold_6915
Order: Natrialbales (66.67%)
3 3110 bp 64.82 36.56 89.23
qh_6_scaffold_4213
Order: Haloferacales (50%)
4 3063 bp 67.94 57.85 89.13
qh_6_scaffold_2293
Genus: Natronomonas (76.92%)
13 5254 bp 69.49 91.66 89.09
qh_6_scaffold_3107
Species: Natronomonas moolapensis (60%)
5 5179 bp 73.59 78.10 89.09
qh_6_scaffold_4869
Genus: Natronomonas (71.43%)
7 4133 bp 70.24 45.56 89.06
qh_6_scaffold_5860
Species: Halosimplex carlsbadense (50%)
4 3083 bp 71.26 45.60 89.04
qh_6_scaffold_6313
Species: Haloterrigena salina (50%)
2 3619 bp 70.30 11.00 89.03
qh_6_scaffold_2320
Order: Halobacteriales (50%)
6 8260 bp 67.13 31.86 88.91
qh_6_scaffold_3094
Genus: Natronomonas (66.67%)
3 3593 bp 71.86 45.95 88.84
qh_6_scaffold_2786
Order: Halobacteriales (57.14%)
7 4914 bp 70.17 67.64 88.83
Displaying items 101-150 of 506 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.