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qh_6_scaffold_4

Search features with annotation key words

Displaying items 31-51 of 51 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_6_scaffold_4_31
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(29990..31336)
DNA (1347bp) protein (449aa)
Ribonuclease J {ECO:0000256|HAMAP-Rule:MF_01492}; Short=RNase J {ECO:0000256|HAMAP-Rule:MF_01492};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01492};; TaxID=797114 species="Archaea; Euryarchaeota; Halobac
Beta-lactamase domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT69_9EURY
putative hydrolase of the metallo-beta-lactamase superfamily
qh_6_scaffold_4_32
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31534..31851)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18DE2_HALWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ51125.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
qh_6_scaffold_4_33
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31919..32713)
DNA (795bp) protein (265aa)
Isopentenyl phosphate kinase {ECO:0000256|PIRNR:PIRNR016496}; Short=IPK {ECO:0000256|PIRNR:PIRNR016496};; EC=2.7.4.26 {ECO:0000256|PIRNR:PIRNR016496};; TaxID=1132509 species="Archaea; Euryarchaeota; H
Aspartate/glutamate/uridylate kinase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MWU3_9EURY
putative archaeal kinase
qh_6_scaffold_4_34
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32796..33797)
DNA (1002bp) protein (334aa)
Mevalonate kinase {ECO:0000256|HAMAP-Rule:MF_00217}; Short=MK {ECO:0000256|HAMAP-Rule:MF_00217};; Short=MVK {ECO:0000256|HAMAP-Rule:MF_00217};; EC=2.7.1.36 {ECO:0000256|HAMAP-Rule:MF_00217};; TaxID=93
mvk; mevalonate kinase (EC:2.7.1.36)
Mevalonate kinase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M7C4_HALMO
qh_6_scaffold_4_35
unknown

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comp(33851..34144)
DNA (294bp) protein (98aa)

This feature has no annotations

qh_6_scaffold_4_36

Not on your lists

34435..35307
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MQ54_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07823.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_6_scaffold_4_37
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(35382..36242)
DNA (861bp) protein (287aa)
30S ribosomal protein S2 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6C5_HALXS
30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000256|SAAS:SAAS00012212}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source=
qh_6_scaffold_4_38
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(36273..37505)
DNA (1233bp) protein (411aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4U4_9EURY
qh_6_scaffold_4_39
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(37477..37695)
DNA (219bp) protein (73aa)
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit K n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HNG4_9EURY
DNA-directed RNA polymerase subunit K/omega
qh_6_scaffold_4_40
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(37692..37886)
DNA (195bp) protein (65aa)
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250, ECO:0000313|EMBL:KDS91409.1}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=2248 species="Archaea; Euryarchaeota; Halobac
DNA-directed RNA polymerase subunit N n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SRX6_9EURY
DNA-directed RNA polymerase subunit N
qh_6_scaffold_4_41
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(38009..38404)
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP64_9EURY
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
rps9p; 30S ribosomal protein S9
qh_6_scaffold_4_42
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(38398..38841)
DNA (444bp) protein (148aa)
50S ribosomal protein L13 n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L322_9EURY
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;
ribosomal protein L13, archaeal/eukaryotic
qh_6_scaffold_4_43
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(38838..39188)
DNA (351bp) protein (117aa)
50S ribosomal protein L18e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4V0_9EURY
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
50S ribosomal protein L18
qh_6_scaffold_4_trna_2
unknown

Not on your lists

comp(39365..39449)
DNA (85bp)
transferRNA
qh_6_scaffold_4_44
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(39597..40367)
DNA (771bp) protein (257aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit D n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQ17_9EURY
DNA-directed RNA polymerase, alpha subunit/40 kD subunit
qh_6_scaffold_4_45
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(40370..40756)
DNA (387bp) protein (129aa)
30S ribosomal protein S11 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSE7_9EURY
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauciha
rps11p; 30S ribosomal protein S11P
qh_6_scaffold_4_46
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(40773..41300)
DNA (528bp) protein (176aa)
30S ribosomal protein S4 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP59_9EURY
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
rps4p; 30S ribosomal protein S4P
qh_6_scaffold_4_47
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(41300..41821)
DNA (522bp) protein (174aa)
30S ribosomal protein S13 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MSK5_9EURY
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
30S ribosomal protein S13
qh_6_scaffold_4_trna_1
unknown

Not on your lists

comp(41899..41984)
DNA (86bp)
transferRNA
qh_6_scaffold_4_48

Not on your lists

42337..42543
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y1B7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS06396.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
qh_6_scaffold_4_49
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(42770..43012)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HLJ1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ85361.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;
Collagen domain protein
Displaying items 31-51 of 51 in total

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