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qh_6_scaffold_295_20

Organism: QH_6_Halobacteriales_64_20

near complete RP 32 / 55 MC: 4 BSCG 29 / 51 ASCG 38 / 38
Location: 18675..20132

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 485.0
  • Bit_score: 827
  • Evalue 9.50e-237
tRNA-splicing ligase RtcB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUD1_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 485.0
  • Bit_score: 827
  • Evalue 6.80e-237
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 486.0
  • Bit_score: 794
  • Evalue 1.40e-227

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1458
ATGAGCACCTACGACGCGAACGGCATCACCCTACAGCAGGTCCGCGAACACGTCTGGGAGATCCCCCAGGACGGCGAGATGGGCGCGCCGGCACGCGTGCTCGCGAGCGAGGCGCTGCTCGACGAGATTTCCGACGACCGAACGCTCCAGCAACTGAAAAACGCCACCCAACTGCCGGGCGTGCAAGAACACGCGCTCTGTATGCCCGACGGTCACCAGGGCTATGGCTTCCCCGTGGGCGGGGTCGCCGGTATCGATGCCGAAAACGGTTGCATCTCGCCTGGAGCGGTCGGTTTCGACGTAAATTGCGGCGTAAGAATGGTACGGACGAACTTAGCCTACGGGGACGTCGAGGGCCACGAGCGCGAACTGGTGAACGAGTTGTTCGACGCGATTCCCTCGGGACTGGGCGGCGGTGGCGTCGTCGAGACCGACGTTGCGACCGTCGAGGACGTCCTCGACCGTGGGACCGATTGGGCGCTCGAAGAGGGGTACGCTACCCGGGAGGACCTGACTCACTGCGAGGACGAGGGCCAGCGCGAGGAAGCCGACGCCGACGCCGTATCGCAGAAAGCTAAAGACCGCGGTAAGAACCAGCTAGGAAGTTTGGGATCGGGCAACCACTTCCTCGAGGTCCAACGCGTGACCGACGTCTTTCGCCCCGAGGTCGCCGACGCCTACGGCCTCGCGGAAAACCAAGTGGTCGTCCTCATCCACTGTGGGTCCAGGGGCCTCGGCCACCAGGTCTGTACGGACTACGTTCGACGGATAGAGGAGGCCCACCCCGACCTGCTCGACCGACTGCCCGATAAGGACTTAGCTGCCGCGCCCGCCGGGAGCGACCTCGCCGAGGAGTACTACCGTGCGATGGGCGCAGCAATCAACTACGCGTGGGTCAACCGTCAGCTCATTACCCATCGCACCAGAAAGGCGTTCGAAGACGTGTTCGATGCCGAGCCCAAGGATCTGGGAATGGAACTGCTCTACGATGTCGCCCACAACATTGCCAAAAAGGAGGTCCACGACGTCGATGGCGAGGACCGCGAACTCTACGTCCACCGCAAGGGCGCGACGCGGGCCTTTCCCGCCGGTCGGCCCGAGGTACCGAAGGCGTACCGTGACGTCGGCCAGCCGGTCATCATTCCCGGAAGCATGGGTGCCGGTAGTTACGTGCTCCGAGGCGGCGACGCGTCGCTCGATCGGACCTTCGGCTCGACGGCCCACGGCGCTGGCCGAACCATGAGCCGCACACAGGCCAAGCAGGACTTCTGGGGCGAAGACGTCAGGGACGACCTCGAAGGCCAGCAGGTCTACGTCAAAGCCCAAAGCGGAGCGACCATCGCCGAAGAAGCGCCCGGCGTCTACAAGGACGTCGACGAGGTGATCAGGATCTCCGAAGCGCTCGGCATCGGCGATCCCGTGGCCCGAACGTTCCCGGTCTGTAACATCAAGGGATAG
PROTEIN sequence
Length: 486
MSTYDANGITLQQVREHVWEIPQDGEMGAPARVLASEALLDEISDDRTLQQLKNATQLPGVQEHALCMPDGHQGYGFPVGGVAGIDAENGCISPGAVGFDVNCGVRMVRTNLAYGDVEGHERELVNELFDAIPSGLGGGGVVETDVATVEDVLDRGTDWALEEGYATREDLTHCEDEGQREEADADAVSQKAKDRGKNQLGSLGSGNHFLEVQRVTDVFRPEVADAYGLAENQVVVLIHCGSRGLGHQVCTDYVRRIEEAHPDLLDRLPDKDLAAAPAGSDLAEEYYRAMGAAINYAWVNRQLITHRTRKAFEDVFDAEPKDLGMELLYDVAHNIAKKEVHDVDGEDRELYVHRKGATRAFPAGRPEVPKAYRDVGQPVIIPGSMGAGSYVLRGGDASLDRTFGSTAHGAGRTMSRTQAKQDFWGEDVRDDLEGQQVYVKAQSGATIAEEAPGVYKDVDEVIRISEALGIGDPVARTFPVCNIKG*