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qh_6_scaffold_20252_2

Organism: QH_6_Salinibacter_ruber_64_77

near complete RP 47 / 55 MC: 3 BSCG 42 / 51 MC: 1 ASCG 8 / 38 MC: 2
Location: comp(594..836)

Top 3 Functional Annotations

Value Algorithm Source
rpoE; RNA polymerase sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 97.4
  • Coverage: 78.0
  • Bit_score: 156
  • Evalue 4.10e-36
rpoE; RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24658709 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 79.0
  • Bit_score: 156
  • Evalue 1.50e-35
RNA polymerase sigma-E factor {ECO:0000313|EMBL:CBH25894.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 78.0
  • Bit_score: 156
  • Evalue 2.00e-35

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 243
TTGCCTCCCGACAAGCATGCGGAGAGCACGATCCAGGATCATTACATCCAGGAGGCCATGAACGAGATTCCGCCGGCCTTCCGCGAGGTCGTGGTCCTGCGCGACATCCAGCAGCTCGCGTACGACGAGATTGCGGAGATCACGGGCCTGCCCATGGGCACCGTCAAGAGCCGCATCAACCGTGGTCGCACCAAGCTGCAGGCGCTGCTCGAGGACGTGTATCCGTTTCAGGACGAAGAATGA
PROTEIN sequence
Length: 81
LPPDKHAESTIQDHYIQEAMNEIPPAFREVVVLRDIQQLAYDEIAEITGLPMGTVKSRINRGRTKLQALLEDVYPFQDEE*