ggKbase home page

QH_6_Salinibacter_ruber_64_77

QH_6_Salinibacter_ruber_63_78
In projects: QH_6

Consensus taxonomy: Salinibacter ruber  →  Salinibacter  →  Bacteroidetes Order II. Incertae sedis  →  Bacteroidetes  →  Bacteria

Displaying items 1-50 of 195 in total
Loading...
contig # features sequence size GC content (%) Cov Coding Density (%) notes
qh_6_scaffold_22271
Species: Salinibacter ruber (100%)
2 1018 bp 64.34 67.78 80.45
qh_6_scaffold_21245
Species: Salinibacter ruber (100%)
2 1060 bp 64.53 63.77 72.17
qh_6_scaffold_34254
Species: Salinibacter ruber (100%)
2 1092 bp 63.19 68.96 90.38
qh_6_scaffold_20405
Species: Salinibacter ruber (50%)
2 1097 bp 61.71 65.91 44.85
qh_6_scaffold_20078
Species: Salinibacter ruber (100%)
1 1112 bp 65.20 63.58 38.31
qh_6_scaffold_19633
Species: Salinibacter ruber (100%)
2 1133 bp 63.46 66.99 45.54
qh_6_scaffold_19233
Species: Salinibacter ruber (100%)
2 1152 bp 64.15 65.89 52.86
qh_6_scaffold_18568
Species: Salinibacter ruber (100%)
2 1186 bp 65.60 62.73 99.66
qh_6_scaffold_18398
Species: Salinibacter ruber (100%)
3 1195 bp 63.68 74.56 82.09
qh_6_scaffold_32988
Species: Salinibacter ruber (50%)
2 1217 bp 65.00 68.43 67.79
qh_6_scaffold_17898
Species: Salinibacter ruber (100%)
1 1220 bp 60.66 66.15 58.03
qh_6_scaffold_17742
Species: Salinibacter ruber (100%)
3 1230 bp 64.23 75.37 69.27
qh_6_scaffold_17690
Species: Salinibacter ruber (50%)
2 1233 bp 61.48 67.07 70.80
qh_6_scaffold_17630
Species: Salinibacter ruber (100%)
1 1236 bp 64.48 66.83 99.76
qh_6_scaffold_15783
Species: Salinibacter ruber (100%)
2 1353 bp 64.45 74.76 62.75
qh_6_scaffold_24635
Species: Salinibacter ruber (100%)
2 1385 bp 65.56 68.72 77.98
qh_6_scaffold_14830
Species: Salinibacter ruber (100%)
1 1412 bp 62.18 66.64 64.59
qh_6_scaffold_14760
Species: Salinibacter ruber (100%)
2 1416 bp 65.25 68.79 82.20
qh_6_scaffold_13859
Species: Salinibacter ruber (100%)
2 1482 bp 64.91 66.80 92.71
qh_6_scaffold_29429
Species: Salinibacter ruber (50%)
2 1509 bp 60.57 69.12 29.42
qh_6_scaffold_13292
Species: Salinibacter ruber (100%)
4 1526 bp 60.75 76.47 71.36
qh_6_scaffold_12289
Species: Salinibacter ruber (100%)
2 1615 bp 62.23 65.45 74.30
qh_6_scaffold_12003
Species: Salinibacter ruber (66.67%)
3 1642 bp 61.39 68.45 92.45
qh_6_scaffold_14626
Species: Salinibacter ruber (100%)
2 1648 bp 65.59 68.57 84.10
qh_6_scaffold_9645
Species: Salinibacter ruber (100%)
4 1888 bp 62.50 69.01 73.73
qh_6_scaffold_24104
Species: Salinibacter ruber (75%)
4 1915 bp 60.78 65.95 86.48
qh_6_scaffold_15972
Species: Salinibacter ruber (100%)
1 1961 bp 65.53 68.43 63.18
qh_6_scaffold_20287
Species: Salinibacter ruber (66.67%)
3 2036 bp 62.62 63.65 89.44
qh_6_scaffold_8509
Species: Salinibacter ruber (50%)
2 2041 bp 65.41 67.27 75.85
qh_6_scaffold_8493
Species: Salinibacter ruber (100%)
3 2044 bp 61.89 75.38 94.67
qh_6_scaffold_14440
Species: Salinibacter ruber (100%)
3 2093 bp 65.07 66.60 79.98
qh_6_scaffold_8091
Species: Salinibacter ruber (100%)
1 2105 bp 61.28 75.53 85.65
qh_6_scaffold_7898
Species: Salinibacter ruber (100%)
3 2139 bp 65.03 73.54 88.92
qh_6_scaffold_20378
Species: Salinibacter ruber (100%)
2 2148 bp 65.27 69.45 94.27
qh_6_scaffold_17246
Species: Salinibacter ruber (100%)
3 2178 bp 61.98 66.99 60.74
qh_6_scaffold_7644
Species: Salinibacter ruber (66.67%)
3 2181 bp 65.52 66.99 76.75
qh_6_scaffold_11683
Species: Salinibacter ruber (100%)
2 2194 bp 64.22 64.86 48.95
qh_6_scaffold_7483
Species: Salinibacter ruber (100%)
1 2210 bp 62.49 62.90 99.91
qh_6_scaffold_7468
Species: Salinibacter ruber (100%)
3 2213 bp 61.14 62.54 89.06
qh_6_scaffold_14352
Species: Salinibacter ruber (80%)
5 2233 bp 65.74 74.29 83.30
qh_6_scaffold_7317
Species: Salinibacter ruber (50%)
4 2236 bp 61.90 74.69 63.46
qh_6_scaffold_6989
Species: Salinibacter ruber (100%)
2 2295 bp 63.70 67.23 89.67
qh_6_scaffold_11229
Species: Salinibacter ruber (100%)
1 2314 bp 61.50 66.21 70.27
qh_6_scaffold_9479
Species: Salinibacter ruber (100%)
3 2337 bp 64.83 63.80 91.01
qh_6_scaffold_6572
Species: Salinibacter ruber (50%)
2 2377 bp 61.84 74.72 74.97
qh_6_scaffold_6553
Species: Salinibacter ruber (100%)
2 2381 bp 60.90 62.58 79.00
qh_6_scaffold_13564
Species: Salinibacter ruber (100%)
3 2394 bp 64.24 74.35 85.84
qh_6_scaffold_6193
Species: Salinibacter ruber (50%)
2 2458 bp 63.55 68.84 81.41
qh_6_scaffold_15320
Species: Salinibacter ruber (100%)
1 2481 bp 64.37 69.37 100.00
qh_6_scaffold_21521
Species: Salinibacter ruber (100%)
3 2596 bp 64.52 68.64 78.35
Displaying items 1-50 of 195 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.