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QH_7_UNK

In projects: QH_7  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 25.29 Longest contig: 83.04 Kbp Bin length: 52.16 Mbp GC content: 60.76 %
Contigs count: 21495 Features count: 67681 rRNAs count: 18 tRNAs count: 616

Genome completeness

megabin RP 53 / 55 MC: 42 BSCG 42 / 51 MC: 32 ASCG 38 / 38 MC: 38
Displaying items 501-550 of 21495 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_7_scaffold_7627
Species: Halococcus thailandensis (100%)
3 2733 bp 60.96 12.53 100.22
qh_7_scaffold_10587
Species: Halalkalicoccus jeotgali (50%)
2 1829 bp 69.22 12.79 100.22
qh_7_scaffold_30248
Species: halophilic archaeon J07HB67 (50%)
2 1395 bp 66.24 19.00 100.22
qh_7_scaffold_10275
Species: Candidatus Halobonum tyrrellensis (50%)
2 1868 bp 73.82 14.83 100.21
qh_7_scaffold_10029
Species: Natronomonas pharaonis (50%)
2 1898 bp 75.03 44.68 100.21
qh_7_scaffold_15169
Species: Natrialba hulunbeirensis (100%)
2 1440 bp 53.19 11.04 100.21
qh_7_scaffold_9710
Order: Halobacteriales (66.67%)
3 1937 bp 67.99 7.07 100.21
qh_7_scaffold_27660
Species: Halorubrum lipolyticum (100%)
3 1458 bp 58.23 5.90 100.21
qh_7_scaffold_10233
Species: Blastocystis hominis (50%)
2 2431 bp 53.85 5.96 100.21
qh_7_scaffold_14884
Species: Natronomonas pharaonis (50%)
2 1461 bp 67.35 46.34 100.21
qh_7_scaffold_14696
Species: Halobacterium sp. DL1 (50%)
2 1473 bp 69.45 16.02 100.20
qh_7_scaffold_9421
Order: Natrialbales (50%)
4 1976 bp 70.45 11.49 100.20
qh_7_scaffold_9423
Species: R_OD1_Nomurabacteria_39_17 (50%)
2 1976 bp 41.90 8.96 100.20
qh_7_scaffold_14573
Species: Halosimplex carlsbadense (50%)
2 1482 bp 66.53 24.83 100.20
qh_7_scaffold_24846 2 1003 bp 51.25 6.78 100.20
qh_7_scaffold_14132
Species: Halobacterium sp. DL1 (50%)
2 1512 bp 65.94 9.19 100.20
qh_7_scaffold_24446
Species: Natronomonas moolapensis (50%)
2 1015 bp 69.95 38.52 100.20
qh_7_scaffold_24352
Species: Halosimplex carlsbadense (50%)
2 1018 bp 70.63 10.12 100.20
qh_7_scaffold_2209 3 5090 bp 58.07 10.81 100.20
qh_7_scaffold_24233
Species: halophilic archaeon J07HX64 (50%)
2 1021 bp 70.13 43.88 100.20
qh_7_scaffold_6312
Species: Halorubrum aidingense (66.67%)
3 2560 bp 71.72 36.02 100.20
qh_7_scaffold_13819 2 1536 bp 68.03 10.87 100.20
qh_7_scaffold_24073
Species: Natronomonas pharaonis (100%)
2 1027 bp 69.23 37.97 100.20
qh_7_scaffold_23973 2 1030 bp 43.50 4.85 100.19
qh_7_scaffold_23856
Species: Haloferax mediterranei (50%)
2 1033 bp 65.54 6.29 100.19
qh_7_scaffold_26072
Species: Haladaptatus paucihalophilus (50%)
2 1551 bp 62.80 10.90 100.19
qh_7_scaffold_23785
Species: Halococcus salifodinae (100%)
2 1036 bp 54.25 6.08 100.19
qh_7_scaffold_19392
Species: Cyanothece sp. PCC 7424 (50%)
2 1563 bp 50.10 35.38 100.19
qh_7_scaffold_23620
Order: Natrialbales (50%)
4 1042 bp 69.48 26.87 100.19
qh_7_scaffold_21085 2 1566 bp 72.09 8.88 100.19
qh_7_scaffold_4600
Domain: Bacteria (75%)
4 3135 bp 72.79 8.87 100.19
qh_7_scaffold_23199
Species: Halorhabdus tiamatea (50%)
2 1057 bp 68.40 11.83 100.19
qh_7_scaffold_23203
Species: Halorhabdus utahensis (50%)
2 1057 bp 65.00 8.61 100.19
qh_7_scaffold_7863
Species: Halosimplex carlsbadense (100%)
2 2644 bp 68.04 61.73 100.19
qh_7_scaffold_23105
Species: Haloterrigena salina (50%)
2 1060 bp 48.21 6.60 100.19
qh_7_scaffold_23109
Species: Haloarcula japonica (50%)
2 1060 bp 71.23 18.40 100.19
qh_7_scaffold_13031
Species: Halococcus saccharolyticus (66.67%)
3 1599 bp 64.48 13.51 100.19
qh_7_scaffold_4457
Species: halophilic archaeon J07HX64 (100%)
3 3198 bp 70.70 12.29 100.19
qh_7_scaffold_22937
Species: Halococcus saccharolyticus (100%)
2 1066 bp 63.88 9.76 100.19
qh_7_scaffold_22877
Species: Halosimplex carlsbadense (50%)
2 1069 bp 68.76 9.64 100.19
qh_7_scaffold_22705
Species: Halogeometricum pallidum (50%)
2 1075 bp 59.26 7.63 100.19
qh_7_scaffold_22627
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
2 1078 bp 66.23 9.55 100.19
qh_7_scaffold_22633
Species: Natronomonas moolapensis (100%)
2 1078 bp 67.90 46.01 100.19
qh_7_scaffold_22444
Species: Haloquadratum sp. J07HQX50 (50%)
2 1084 bp 64.85 13.65 100.18
qh_7_scaffold_12718
Species: uncultured archaeon A07HR67 (50%)
2 1626 bp 59.96 9.84 100.18
qh_7_scaffold_12638
Species: Halovivax ruber (50%)
2 1632 bp 70.04 37.56 100.18
qh_7_scaffold_26060
Species: Halococcus hamelinensis (50%)
2 1644 bp 71.11 59.06 100.18
qh_7_scaffold_12489
Species: Halosimplex carlsbadense (60%)
5 1644 bp 59.67 14.54 100.18
qh_7_scaffold_22107
Species: Halococcus thailandensis (50%)
2 1096 bp 64.14 11.04 100.18
qh_7_scaffold_22121
Species: Haloterrigena limicola (50%)
2 1096 bp 63.87 7.66 100.18
Displaying items 501-550 of 21495 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.