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QH_7_UNK

In projects: QH_7  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 25.29 Longest contig: 83.04 Kbp Bin length: 52.16 Mbp GC content: 60.76 %
Contigs count: 21495 Features count: 67681 rRNAs count: 18 tRNAs count: 616

Genome completeness

megabin RP 53 / 55 MC: 42 BSCG 42 / 51 MC: 32 ASCG 38 / 38 MC: 38
Displaying items 201-250 of 21495 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_7_scaffold_17992
Species: Naegleria gruberi (66.67%)
3 1275 bp 32.63 4.39 73.18
qh_7_scaffold_21632
Species: Lentisphaera araneosa (50%)
2 1115 bp 57.13 4.39 93.63
qh_7_scaffold_21116
Species: Halomicrobium mukohataei (100%)
1 1136 bp 56.51 4.40 86.62
qh_7_scaffold_47337 1 1361 bp 38.43 4.41 36.59
qh_7_scaffold_24250 1 1021 bp 50.24 4.41 99.31
qh_7_scaffold_21181 2 1133 bp 48.19 4.41 100.35
qh_7_scaffold_10959
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1789 bp 45.84 4.42 98.27
qh_7_scaffold_13560 4 1557 bp 35.97 4.43 59.34
qh_7_scaffold_34228
Species: Haladaptatus paucihalophilus (50%)
2 1354 bp 48.67 4.43 88.40
qh_7_scaffold_23069 1 1062 bp 43.88 4.43 15.54
qh_7_scaffold_21932 2 1103 bp 52.49 4.44 45.15
qh_7_scaffold_17416 4 1305 bp 48.51 4.44 95.63
qh_7_scaffold_37075 1 1420 bp 38.03 4.44 86.20
qh_7_scaffold_22511
Species: Gemmatimonas aurantiaca (50%)
2 1082 bp 55.82 4.44 88.17
qh_7_scaffold_5103
Phylum: Microgenomates (66.67%)
3 2930 bp 43.62 4.44 90.61
qh_7_scaffold_23209
Species: Natronomonas pharaonis (50%)
2 1057 bp 41.72 4.45 92.53
qh_7_scaffold_45941
Species: RBG_16_KB1_OP1_55_9_curated (50%)
2 1147 bp 52.48 4.45 89.97
qh_7_scaffold_13955 3 1526 bp 48.56 4.46 80.60
qh_7_scaffold_10341 1 1860 bp 46.94 4.46 100.00
qh_7_scaffold_22042 3 1099 bp 51.41 4.46 99.64
qh_7_scaffold_17493
Species: Rubrobacter xylanophilus (50%)
2 1300 bp 62.62 4.46 79.85
qh_7_scaffold_24718 2 1006 bp 37.67 4.47 81.71
qh_7_scaffold_8531 1 2105 bp 41.05 4.47 99.91
qh_7_scaffold_24777 2 1005 bp 44.98 4.48 97.31
qh_7_scaffold_21583 3 1116 bp 40.05 4.48 92.47
qh_7_scaffold_6461
Domain: Bacteria (100%)
3 2525 bp 38.57 4.48 85.43
qh_7_scaffold_8591
Species: GWC2_Elusimicrobia_56_31_curated (100%)
1 2095 bp 50.69 4.49 99.95
qh_7_scaffold_20515
Species: Phycisphaera mikurensis (50%)
2 1159 bp 62.30 4.49 92.67
qh_7_scaffold_39035 2 1404 bp 49.50 4.49 53.63
qh_7_scaffold_22900
Species: Haloarcula amylolytica (100%)
1 1068 bp 51.87 4.49 89.89
qh_7_scaffold_21760
Species: marine sediment metagenome (50%)
2 1110 bp 43.96 4.50 98.65
qh_7_scaffold_21767
Species: Clostridium ultunense (50%)
2 1110 bp 40.99 4.50 100.81
qh_7_scaffold_19583
Species: Yarrowia lipolytica (100%)
1 1199 bp 54.38 4.50 39.03
qh_7_scaffold_20614 1 1155 bp 45.37 4.50 11.17
qh_7_scaffold_22932
Species: halophilic archaeon DL31 (50%)
2 1067 bp 42.83 4.50 87.16
qh_7_scaffold_16191
Species: Natrinema altunense (50%)
2 1375 bp 52.65 4.51 99.05
qh_7_scaffold_5430
Class: Halobacteria (50%)
4 2818 bp 36.87 4.51 89.53
qh_7_scaffold_22621 6 1908 bp 36.01 4.51 83.02
qh_7_scaffold_17746
Species: Haloterrigena thermotolerans (100%)
1 1286 bp 45.49 4.51 83.75
qh_7_scaffold_24304 1 1019 bp 42.49 4.51 99.80
qh_7_scaffold_23640
Species: Geobacillus stearothermophilus (50%)
2 1041 bp 51.49 4.51 95.97
qh_7_scaffold_24398
Species: Escherichia coli (100%)
1 1017 bp 56.54 4.52 100.00
qh_7_scaffold_22455
Species: Collinsella tanakaei (100%)
1 1084 bp 43.54 4.52 79.15
qh_7_scaffold_23036
Species: Halorubrum sp. AJ67 (50%)
2 1063 bp 54.56 4.52 88.62
qh_7_scaffold_16261 3 1371 bp 47.12 4.52 73.09
qh_7_scaffold_6197 6 2588 bp 35.78 4.52 93.78
qh_7_scaffold_24400 1 1016 bp 40.85 4.53 99.80
qh_7_scaffold_19784 2 1190 bp 52.86 4.54 52.69
qh_7_scaffold_13767
Species: Halorhabdus tiamatea (100%)
2 1541 bp 43.22 4.54 92.28
qh_7_scaffold_14022 4 1520 bp 34.80 4.54 89.80
Displaying items 201-250 of 21495 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.