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qh_7_scaffold_68_4

Organism: QH_7_Oscillatoriophycideae_48_89

near complete RP 48 / 55 MC: 3 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(2245..2727)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XJ54_9CHRO similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 122.0
  • Bit_score: 123
  • Evalue 2.70e-25
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 122.0
  • Bit_score: 123
  • Evalue 7.70e-26
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AFZ32645.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. P similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 122.0
  • Bit_score: 123
  • Evalue 3.80e-25

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Taxonomy

Gloeocapsa sp. PCC 7428 → Gloeocapsa → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 483
GTGGCTGGAAGCGATCAAGATTCGCAATCCCCAGTTAGGTCGCTTCCTGTGCCAGATTATTCCAGCACAACACTGAGCGCAGAAGCCAGCTTCAGCCAGCTTCATTCCCCTGGTCCAGAATGCAGTCCAGAAACATTGGAGGAGTGGATGCTAGTCTGTGCCAAGGCAGCCTGCGCCTACCTATATCCTACCTTGAGTTCGCTCAACACCCCTAGACCAGGGCAAGAGTCGGGTGAGCAACTCGATCAGTTGGTAGGAGATGTCGATGATTCCCTCTTGAGTAATTTAATTGCAGAGGAAGAATCACAGACTCGCCAGACGCAGCAATCTCAAATCAATACAGTATTGATCTCCGCCTTAGCTAAACTAGACTCACAAGTCCAACAACTCTTGGAAGCTGTACTACGCTCAAGGACTGACTCAACAAGAGATGGCAGAACGGTTAAGTACGAAACAGTATACTATCTCGCGGCGATTCTCTAA
PROTEIN sequence
Length: 161
VAGSDQDSQSPVRSLPVPDYSSTTLSAEASFSQLHSPGPECSPETLEEWMLVCAKAACAYLYPTLSSLNTPRPGQESGEQLDQLVGDVDDSLLSNLIAEEESQTRQTQQSQINTVLISALAKLDSQVQQLLEAVLRSRTDSTRDGRTVKYETVYYLAAIL*