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qh_7_scaffold_7287_4

Organism: QH_7_Salinibacter_ruber_64_110

partial RP 41 / 55 MC: 1 BSCG 36 / 51 ASCG 6 / 38 MC: 1
Location: 1502..2101

Top 3 Functional Annotations

Value Algorithm Source
rpoD; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 178.0
  • Bit_score: 332
  • Evalue 1.00e-88
rpoD; RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24658079 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 178.0
  • Bit_score: 332
  • Evalue 3.70e-88
RNA polymerase sigma factor {ECO:0000313|EMBL:CBH25282.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 178.0
  • Bit_score: 332
  • Evalue 5.20e-88

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 600
ATGCCTGAGACAGCGTTCGATCCGGACCGCGTTCGTGAGGCCCAAAACGGCGATGAGCAGGCCCGGAATGGGCTGCTCCGTCGGCTGGAGCCCATCCTCCGGGGCTACTTCATCAAACGCATCGGGGCCGAGACCGACGTAGACGATCTGGTGCAGAACACGCTCGTGCGCATTCACGAGAGCCTCGACGACCTCAAGAAGCCAGGCAGCCTGAAGTCGTTCGCCATGAAGGCGGCACTGTTTGAGTTGCAGGATTACTACCGGGGGCGCTACGACATGAAAGAGAGCCTGCGCGATCCTGATCTGCCCCTGGGACGGTCGACGGAGCCGGAGGATCGGAGTGCCCACGTGGACGTCGAAAAAGCGCTTGAGGCCCTAACCCCCAAGGCGCGGCGCATTATGGAGCTCCGCGAGTACGGGTATCTTTACCGCGAAATCGCTCAGATGCTCGATACCACCGAAGCGGCGGTCAAGATGCAGGTCAAGCGAGCCTTCGAAACCATGAAAGAGGCGCTGAGTGCCCTGCTGATTCTCTTCGACCAGAGCCGACCAAATTCCGACACCGCGGTGACGGATTTTGGGATCGGTTTTTCGTGCTGA
PROTEIN sequence
Length: 200
MPETAFDPDRVREAQNGDEQARNGLLRRLEPILRGYFIKRIGAETDVDDLVQNTLVRIHESLDDLKKPGSLKSFAMKAALFELQDYYRGRYDMKESLRDPDLPLGRSTEPEDRSAHVDVEKALEALTPKARRIMELREYGYLYREIAQMLDTTEAAVKMQVKRAFETMKEALSALLILFDQSRPNSDTAVTDFGIGFSC*