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qh_8_scaffold_1720

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_1720_1
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..138
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JU70_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA12526.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
qh_8_scaffold_1720_2
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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141..485
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NIW1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA57004.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
qh_8_scaffold_1720_3
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(593..940)
DNA (348bp) protein (116aa)
ABC transporter-related protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PGM8_9EURY
Nitrate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDE59408.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagn
ABC transporter-related protein
qh_8_scaffold_1720_4
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(937..1296)
DNA (360bp) protein (120aa)
ABC transporter-related protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E9Q6_9EURY
ABC transporter-related protein {ECO:0000313|EMBL:ELZ43144.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiens
ABC transporter-related protein
qh_8_scaffold_1720_5
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1287..2129)
DNA (843bp) protein (281aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HWX5_9EURY
Nitrate ABC transporter permease {ECO:0000313|EMBL:KDE59409.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A
binding-protein-dependent transporters inner membrane component
qh_8_scaffold_1720_6
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2126..3151)
DNA (1026bp) protein (342aa)
nitrate ABC transporter substrate-binding protein n=1 Tax=Halomicrobium katesii RepID=UPI00036AF9CE
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein {ECO:0000313|EMBL:ELZ88990.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
qh_8_scaffold_1720_7
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3281..3991)
DNA (711bp) protein (237aa)
CopG family transcripitonal regulator; K07722 CopG family transcriptional regulator, nickel-responsive regulator id=24622029 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp.
hypothetical protein
qh_8_scaffold_1720_8
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4079..4507)
DNA (429bp) protein (143aa)
Endoribonuclease L-PSP n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JU47_NATP1
putative translation initiation inhibitor, yjgF family
Endoribonuclease L-PSP {ECO:0000313|EMBL:ELY69103.1}; Putative translation initiation inhibitor, yjgF family {ECO:0000313|EMBL:AGB33916.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria;
qh_8_scaffold_1720_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5004..5960)
DNA (957bp) protein (319aa)
Putative HTH-type transcriptional regulatory protein NP_1320A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Y1320_NATPD
hypothetical protein
Putative HTH-type transcriptional regulatory protein NP_1320A {ECO:0000255|HAMAP-Rule:MF_00584}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronom
qh_8_scaffold_1720_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6083..7720
DNA (1638bp) protein (546aa)
tiaS; tRNAIle2(CAT)--2-agmatinylcytidine synthetase (EC:6.3.4.-)
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS {ECO:0000256|HAMAP-Rule:MF_01892}; Short=tRNA(Ile2)-agm2C synthetase {ECO:0000256|HAMAP-Rule:MF_01892};; EC=6.3.4.22 {ECO:0000256|HAMAP-Rule:MF_01892};;
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSQ7_NATM8
qh_8_scaffold_1720_11
unknown

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7754..8299
DNA (546bp) protein (182aa)

This feature has no annotations

qh_8_scaffold_1720_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8580..8708)
DNA (129bp) protein (43aa)
AstE family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y4E0_NATM8
AstE family protein
AstE family protein {ECO:0000313|EMBL:CCQ37386.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (stra
Displaying 12 items

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