ggKbase home page

qh_8_scaffold_31559_2

Organism: QH_8_UNK

megabin RP 52 / 55 MC: 46 BSCG 46 / 51 MC: 44 ASCG 38 / 38 MC: 38
Location: comp(712..1002)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CYK6_9VIBR similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 80.0
  • Bit_score: 90
  • Evalue 9.00e-16
RNA polymerase, sigma-24 subunit, ECF subfamily protein {ECO:0000313|EMBL:EDL54704.1}; TaxID=391591 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 80.0
  • Bit_score: 90
  • Evalue 1.30e-15
RNA polymerase sigma factor sigZ similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 82.0
  • Bit_score: 87
  • Evalue 2.80e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Vibrio shilonii → Vibrio → Vibrionales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
ACCGCCGACTACGACGGGGAGCACGACGTCCACGAAGAAGTCCTCTCCTGGCTGCGCCCGATGGCCGAGAAGCTGCCGGAGATGTACCGGCGCCCGCTCGTAATGGCCGACTTCGAAGGACACACCCAGCAGGAGGTGGCCGACGAGCTGGGCCTTTCGCTCTCCGGGGCCAAATCACGCGTGCAGCGGGCTCGCAAAAAGCTGGGGCGGCGCCTCAAGGACTGCTGCGAGGTCGAGTTTGGGACCGACGGGCGAGCCCGGGAGTTTCGCCGCCGAGAAGGCGAGGCGTGA
PROTEIN sequence
Length: 97
TADYDGEHDVHEEVLSWLRPMAEKLPEMYRRPLVMADFEGHTQQEVADELGLSLSGAKSRVQRARKKLGRRLKDCCEVEFGTDGRAREFRRREGEA*