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QH_8_UNK

In projects: QH_8  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 24.80 Longest contig: 129.40 Kbp Bin length: 65.07 Mbp GC content: 61.69 %
Contigs count: 26699 Features count: 85647 rRNAs count: 16 tRNAs count: 794

Genome completeness

megabin RP 52 / 55 MC: 46 BSCG 46 / 51 MC: 44 ASCG 38 / 38 MC: 38
Displaying items 26301-26350 of 26699 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_8_scaffold_26351
Order: Halobacteriales (66.67%)
3 1163 bp 57.09 4.90 78.93
qh_8_scaffold_5968 4 3201 bp 40.52 4.90 65.60
qh_8_scaffold_28113 1 1103 bp 55.30 4.90 49.50
qh_8_scaffold_15994 5 1698 bp 42.76 4.89 99.29
qh_8_scaffold_27531
Species: Parabacteroides johnsonii (100%)
1 1124 bp 55.16 4.89 99.82
qh_8_scaffold_20668
Species: Halostagnicola larsenii (50%)
2 1410 bp 47.59 4.89 100.21
qh_8_scaffold_21469
Species: Candidatus Halobonum tyrrellensis (50%)
2 1369 bp 56.10 4.89 92.91
qh_8_scaffold_14015 4 1860 bp 46.24 4.89 80.05
qh_8_scaffold_25095 2 1209 bp 34.66 4.88 71.96
qh_8_scaffold_16802 4 1641 bp 44.79 4.88 60.69
qh_8_scaffold_31531
Species: Salinibacter ruber (50%)
2 1004 bp 59.46 4.88 34.06
qh_8_scaffold_26771 3 1150 bp 45.48 4.87 88.70
qh_8_scaffold_26850
Species: Plasmodium knowlesi (50%)
2 2135 bp 39.91 4.87 59.58
qh_8_scaffold_29254
Species: Natronobacterium gregoryi (100%)
1 1067 bp 62.04 4.87 33.74
qh_8_scaffold_14090 5 1853 bp 44.09 4.86 90.66
qh_8_scaffold_29145
Species: Rhodothermus marinus (100%)
1 1070 bp 43.18 4.86 99.81
qh_8_scaffold_31374 1 1008 bp 46.63 4.86 69.64
qh_8_scaffold_13663 5 1892 bp 44.13 4.86 83.25
qh_8_scaffold_29189 1 1069 bp 48.18 4.86 99.91
qh_8_scaffold_29866 1 1050 bp 52.86 4.86 23.43
qh_8_scaffold_24991
Species: Natrinema versiforme (50%)
2 1213 bp 57.30 4.86 93.98
qh_8_scaffold_28506
Species: Haloferax elongans (50%)
2 1090 bp 48.90 4.86 98.81
qh_8_scaffold_19648 4 1463 bp 61.45 4.85 87.97
qh_8_scaffold_8124
Phylum: Euryarchaeota (60%)
5 2658 bp 46.20 4.85 90.18
qh_8_scaffold_27223
Domain: Bacteria (66.67%)
3 1135 bp 50.31 4.85 65.02
qh_8_scaffold_9075 5 2474 bp 46.12 4.85 95.31
qh_8_scaffold_23863 2 1259 bp 50.83 4.85 99.84
qh_8_scaffold_26019 2 1176 bp 32.74 4.85 99.23
qh_8_scaffold_26552 3 1157 bp 43.39 4.84 82.20
qh_8_scaffold_30516 2 1032 bp 56.20 4.84 97.09
qh_8_scaffold_25951 1 1178 bp 49.32 4.84 24.70
qh_8_scaffold_24808
Species: Halarchaeum acidiphilum (100%)
1 1220 bp 49.18 4.84 79.67
qh_8_scaffold_24815 3 1220 bp 51.56 4.84 54.34
qh_8_scaffold_21915
Species: Halogranum salarium (50%)
2 1347 bp 37.34 4.83 94.21
qh_8_scaffold_14211
Domain: Archaea (66.67%)
3 1842 bp 44.08 4.83 97.72
qh_8_scaffold_30407 1 1035 bp 58.07 4.83 99.71
qh_8_scaffold_30410
Species: Spirosoma radiotolerans (100%)
1 1035 bp 54.20 4.83 99.71
qh_8_scaffold_27017
Order: Halobacteriales (66.67%)
3 1142 bp 46.15 4.82 90.63
qh_8_scaffold_27040
Domain: Archaea (66.67%)
3 1141 bp 42.77 4.82 99.91
qh_8_scaffold_30272 1 1038 bp 47.21 4.82 99.71
qh_8_scaffold_31031 4 1017 bp 52.02 4.82 82.01
qh_8_scaffold_27630 3 1121 bp 45.58 4.82 89.92
qh_8_scaffold_29532
Species: Haloarcula sinaiiensis (100%)
1 1059 bp 46.84 4.82 39.09
qh_8_scaffold_9489
Species: Candidatus Nanosalinarum sp. J07AB56 (60%)
5 3090 bp 43.69 4.82 91.75
qh_8_scaffold_28811 1 1079 bp 43.47 4.82 18.35
qh_8_scaffold_30197
Species: Haloferax gibbonsii (50%)
2 1040 bp 42.21 4.81 99.81
qh_8_scaffold_21859 3 1350 bp 44.59 4.81 94.67
qh_8_scaffold_27575
Species: Candidatus Nanosalinarum sp. J07AB56 (50%)
2 1123 bp 43.28 4.81 97.24
qh_8_scaffold_29462
Species: Candidatus Halobonum tyrrellensis (100%)
1 1061 bp 47.97 4.81 99.81
qh_8_scaffold_14289
Species: Candidatus Nanosalinarum sp. J07AB56 (50%)
4 1834 bp 46.51 4.80 101.09
Displaying items 26301-26350 of 26699 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.