ggKbase home page

qh_8_scaffold_10652_1

Organism: QH_8_Salinibacter_ruber_64_112

partial RP 42 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 2..301

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=309807 species="Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 99.0
  • Bit_score: 131
  • Evalue 6.60e-28
2'-5' RNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S292_SALRD similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 99.0
  • Bit_score: 131
  • Evalue 4.80e-28
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 99.0
  • Bit_score: 131
  • Evalue 1.30e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 300
TCGCCCCGCGTCCTGATGCTGGGCCTGAAACGCACCGACTCGATGATGGCGCTCTACGACGCGGTGAGCAACGCCCTCGAAGCGGAAGGGCTCGATCCGGAAGACCGTGAATACCGGCCCCACGTCACGATTGGGCGCCTCGACGACGCAAATCCCGAGGCGGTGCACGCCGTTCTCCGCCGTCACAGGGACCGCTCATTTTCGTCGTTCGAGGCCGACCGCTTCGTTCTCTACGAAAGCACCCTTACATCGGACGGTGCAATCCATGAGCCCCAGGCCACGTATCCGCTCCACAACTGA
PROTEIN sequence
Length: 100
SPRVLMLGLKRTDSMMALYDAVSNALEAEGLDPEDREYRPHVTIGRLDDANPEAVHAVLRRHRDRSFSSFEADRFVLYESTLTSDGAIHEPQATYPLHN*