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qh_8_scaffold_7978_3

Organism: QH_8_Salinibacter_ruber_64_112

partial RP 42 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(3826..4410)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H540_SALRM similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 194.0
  • Bit_score: 318
  • Evalue 4.10e-84
rpoE; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 194.0
  • Bit_score: 318
  • Evalue 1.20e-84
RNA polymerase sigma factor {ECO:0000313|EMBL:CBH23145.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 194.0
  • Bit_score: 318
  • Evalue 5.70e-84

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
ATGCCTGATGCCCGTCCGTTCGACGAGTGGTGCCGGCGCCTGAAGGCGTCGGACCGGTCGGCGTACGCCGAGGTCTTCGACGAAATGTACGAGCCGCTCTTCCGGTACGTCCGGTCGATCACGCAGTCGCCGGAGGCCGCCCAGGACGTGACGCAGGATGCGTTTATCCGGCTGTGGGAGGTGCGCGATTCGCTAAGCCTGAATCAGTCGCTGGAGGCCTATCTCTACCGCATCGCCCGCAACCGGGCCTACAACTACGAGCGCAACCAGCGCACGCGGAGCGAGAAGGAGGCGGACGTGCGCGAGAAGACGCCCGCTCAGCCCGCTCCACCGACGCGGCCCGACGCGCAGGCCAGTGCCCAGCGGCTCGAAGACCGGCTCTGGCAGTGGATCGGCGAGCTCACCGAGCGGCAACGCGAGGCCCTCGTGCTGAGCCGCTTCGACGGCCTGAGTCACGACGAAGTGGCGGAGGTGATGGACATCTCGCCGCGGACGGTGAACAACCACATTGTCCGGGCCCTGAAGCACCTGCGCGGGCGCATCGACGACTACGAACCCGACCTGCTGGATCGCGATGAGCACTGA
PROTEIN sequence
Length: 195
MPDARPFDEWCRRLKASDRSAYAEVFDEMYEPLFRYVRSITQSPEAAQDVTQDAFIRLWEVRDSLSLNQSLEAYLYRIARNRAYNYERNQRTRSEKEADVREKTPAQPAPPTRPDAQASAQRLEDRLWQWIGELTERQREALVLSRFDGLSHDEVAEVMDISPRTVNNHIVRALKHLRGRIDDYEPDLLDRDEH*