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qh_8_scaffold_1143_8

Organism: QH_8_Halococcus_67_70

near complete RP 30 / 55 MC: 6 BSCG 26 / 51 MC: 1 ASCG 34 / 38 MC: 2
Location: comp(4999..6462)

Top 3 Functional Annotations

Value Algorithm Source
Replication factor C large subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2R9_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 491.0
  • Bit_score: 891
  • Evalue 5.00e-256
Replication factor C large subunit {ECO:0000256|HAMAP-Rule:MF_01508, ECO:0000256|SAAS:SAAS00009874}; Short=RFC large subunit {ECO:0000256|HAMAP-Rule:MF_01508};; Clamp loader large subunit {ECO:0000256 similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 491.0
  • Bit_score: 891
  • Evalue 7.00e-256
replication factor C large subunit similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 487.0
  • Bit_score: 723
  • Evalue 3.90e-206

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1464
ATGGATTGGACGGAGAAGTATCGTCCGTCGACGCTCTCCGAGGTCCGTGGCAACAACAAAGCCCGGGACGCGCTCGCGGAGTGGGCCGAGACGTGGGATGCACATGGGGAAGCGGTGGTCCTCCACGGCGCACCCGGAGTGGGGAAGACCTCGGCAGCCCACGCGCTCGCGGCCGACATGGGCTGGCCGACGATCGAACTCAACGCCTCCGACCAGCGGACGAAGGCGGTCGTCGAACGGGTCGCGGGCGAGGCCGCGAAATCGGGCACGCTCACCGAGGGCGGGGCGGGCCGACGGCTCGTCGTCATGGACGAGGCCGACAACCTCCACGGGAACGTCGACCGTGGCGGCTCGCGCGCGATCACGAGCCTCGTGAAGGAGGCCGGCCAGCCGATGGTCCTGATCGCCAACGAGTTCTACGACATGTCGAACTCCCTGCGGAACGCGTGCGAAACCATCGAGTTCCGGGACGTCTCGGCGCGCTCGATCCTGCCCGTGCTCCGGGACATCTCCCGGCGGGAGGACGTCGAGTACGAGCCCGAAGCTCTGGAGGCGATCGCCGAGTCGAACAGCGGCGACCTCCGGGGCGCGGTCAACGACCTCCAGGCGCTCGCGGAGGCGAACGAGCGACTCACCGCCGAGGCCGTGGTCACCGGCGACCGCGATCGGACCACCGGGGTCTTCGACTTCCTCGATGCGCTCATCAAGGAGGAGGACGCAGAGGGCGCCCTCCGGGCCTCCTACGACGCCGACGAGACCCCCGACGACCTCATCAACTGGATCGAGGACAACGTCCCGAAGGACTTCCATGGAGCGGAACTCGCCGACGCCTACGATAGCCTCGCGAACGCGGACCGATGGCTCGGGCGGGTGCGGGCCACTCAGGACTACTCCTACTGGCGCTACGCCGGCGACGCCATGACCGCGGGCGTCGCGGCCGCGCGGCGCGAACCCAAGAGCGGCTGGACCCGGTACGGCCCGCCGAGCTACTGGTCGAAGCTCGGACGCTCGCGGGGCACGCGCGACAAACGCGATTACGTCGCCCAGCACATCGCCGAGGTCGGCGGGATGAGCATGGCGAGCGCGCGCAACGACGTCATGCCGTTTCTCTCGGCGATGACCCACCACTGCAGGAACCGGGAGCTGACGGTGACGATGGCCGCGCGGTACGATCTCGAGGCCGAGCACGTCGCCTTCGTCACCGGCAGCGGGGAGGACACCAACAAGGTCCAGGGGATCGTCGCGGATGCCGCGGAGCTGCGCGACGAGGAAGCGGTCTCGCACGCCGAGGGCGCGTTCGAGGGGGCGACACGAACCACCGGGGAACCCGAAACGGGCGACGGTTCGGCCGACGAAGCGAGCGCCGATCCGACCGATACGGAAGGGGAGGGCGACCGGCACCAGGACGCTGGCGACGACTCCGCAGCCGACGACTCCCAGTCCGGTCTCGGGGACTTCTGCTGA
PROTEIN sequence
Length: 488
MDWTEKYRPSTLSEVRGNNKARDALAEWAETWDAHGEAVVLHGAPGVGKTSAAHALAADMGWPTIELNASDQRTKAVVERVAGEAAKSGTLTEGGAGRRLVVMDEADNLHGNVDRGGSRAITSLVKEAGQPMVLIANEFYDMSNSLRNACETIEFRDVSARSILPVLRDISRREDVEYEPEALEAIAESNSGDLRGAVNDLQALAEANERLTAEAVVTGDRDRTTGVFDFLDALIKEEDAEGALRASYDADETPDDLINWIEDNVPKDFHGAELADAYDSLANADRWLGRVRATQDYSYWRYAGDAMTAGVAAARREPKSGWTRYGPPSYWSKLGRSRGTRDKRDYVAQHIAEVGGMSMASARNDVMPFLSAMTHHCRNRELTVTMAARYDLEAEHVAFVTGSGEDTNKVQGIVADAAELRDEEAVSHAEGAFEGATRTTGEPETGDGSADEASADPTDTEGEGDRHQDAGDDSAADDSQSGLGDFC*