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qh_8_scaffold_5140_8

Organism: QH_8_Viridiplantae_55_7

partial RP 19 / 55 MC: 8 BSCG 16 / 51 MC: 4 ASCG 12 / 38 MC: 4
Location: comp(2790..3494)

Top 3 Functional Annotations

Value Algorithm Source
U5 small nuclear ribonucleoprotein helicase n=1 Tax=Populus trichocarpa RepID=B9I3Q9_POPTR similarity UNIREF
DB: UNIREF100
  • Identity: 41.1
  • Coverage: 73.0
  • Bit_score: 65
  • Evalue 7.50e-08
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 141.0
  • Bit_score: 100
  • Evalue 6.70e-19
U5 small nuclear ribonucleoprotein helicase {ECO:0000313|EMBL:EEE96945.2}; TaxID=3694 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicoty similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 73.0
  • Bit_score: 65
  • Evalue 1.10e-07

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Taxonomy

Populus trichocarpa → Populus → Malpighiales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 705
TCCGCAATCTCCTCGGAGATCTCCCGCCGAATTGACACGTTAAAAGAGAAGATGGGCGAGGGTTCTTATCGCAAAACTAACGCGCCAGCGTTGTCTTCTCAGGTGAGCGTCAAAAGCCAACGAGAGATCGACCAAGAGAAAGCACGACGGAAAGGCGAGCGCAAAGCGAAGCGTAATGCTGCTCAAGGAGCAAATGAGCAGCTTGAGTGGTTGTCAAACAGCGGCGTAAGTTTCGCAGCGGTTCTTGAGTATGTCGAGGATGAGAAAGACACCTCTGTAGTGGGTTCAAATGTTGGAGCTGGATCCAATGATCCGACCGCTTTGGCACTTCCTTCGGGTGCATCGCGATTCTCATATCAGTCATACGAAGAAGTTGAAGTGCCAGCAACAAGCAGTGAGCCACCTGACGTCAAGTTCATTTCTATCAACGAGCTTGATGAGTGGATGCAACCTGCGTTCAATGGAATGAAGAGATTGAATCAGATCCAAAGCCAGATCTTTTCCGTTGCTTTCAGGTATGCCCCCATATTCTTGCTCACTCTGATGGAAATCTTTGAACGAAAAGGTGATGAGGACGTAATAAGTTGCGGTTACGATAACTCATTTTCTCCTTCTCCTCCAGAACAAACGAGAACATGCTTGTCTGCGCACCAACTGGCGCTGGCAAGACGAACATCGCTATGCTTGCAATTCTTCATGAGTTGA
PROTEIN sequence
Length: 235
SAISSEISRRIDTLKEKMGEGSYRKTNAPALSSQVSVKSQREIDQEKARRKGERKAKRNAAQGANEQLEWLSNSGVSFAAVLEYVEDEKDTSVVGSNVGAGSNDPTALALPSGASRFSYQSYEEVEVPATSSEPPDVKFISINELDEWMQPAFNGMKRLNQIQSQIFSVAFRYAPIFLLTLMEIFERKGDEDVISCGYDNSFSPSPPEQTRTCLSAHQLALARRTSLCLQFFMS*