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QH_9_Halobacteriales_65_22

In projects: QH_9  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: QH_9_UNK

Properties

Avg. coverage: 22.03 Longest contig: 28.75 Kbp Bin length: 1.67 Mbp GC content: 65.16 %
Contigs count: 247 Features count: 2100 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 31 / 55 MC: 4 BSCG 28 / 51 ASCG 28 / 38 MC: 6
Displaying items 51-100 of 247 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_9_scaffold_1229
Order: Halobacteriales (72.73%)
11 6896 bp 67.33 21.20 89.14
qh_9_scaffold_4763
Class: Halobacteria (72.73%)
11 7040 bp 65.77 24.01 78.41
qh_9_scaffold_3186
Order: Halobacteriales (81.82%)
11 8236 bp 67.06 24.37 90.66
qh_9_scaffold_2174
Class: Halobacteria (100%)
11 6613 bp 64.22 21.94 87.78
qh_9_scaffold_1949
Order: Halobacteriales (54.55%)
11 9226 bp 63.34 20.53 92.06
qh_9_scaffold_3236
Order: Halobacteriales (72.73%)
11 7429 bp 64.29 23.02 85.89
qh_9_scaffold_820
Class: Halobacteria (81.82%)
11 9622 bp 66.08 25.16 92.38
qh_9_scaffold_898
Order: Halobacteriales (63.64%)
11 7393 bp 65.66 23.54 84.44
qh_9_scaffold_3458
Order: Halobacteriales (72.73%)
11 9643 bp 68.12 24.57 89.51
qh_9_scaffold_4062
Order: Haloferacales (50%)
10 7037 bp 66.02 17.61 88.76
qh_9_scaffold_1669
Order: Halobacteriales (50%)
10 7362 bp 67.55 21.38 88.30
qh_9_scaffold_810
Order: Halobacteriales (50%)
10 7909 bp 65.50 21.24 95.44
qh_9_scaffold_1831
Order: Halobacteriales (70%)
10 6419 bp 66.35 20.19 90.20
qh_9_scaffold_1210
Order: Halobacteriales (80%)
10 10878 bp 63.01 18.58 95.23
qh_9_scaffold_1810
Class: Halobacteria (90%)
10 7021 bp 67.43 22.82 82.21
qh_9_scaffold_2682
Order: Halobacteriales (60%)
10 4654 bp 66.63 23.53 97.08
qh_9_scaffold_2511
Order: Halobacteriales (70%)
10 8098 bp 64.92 21.30 88.98
qh_9_scaffold_1582
Order: Halobacteriales (50%)
10 6593 bp 64.81 19.57 70.26
qh_9_scaffold_2002
Order: Halobacteriales (60%)
10 5263 bp 64.34 20.29 95.93
qh_9_scaffold_3371
Class: Halobacteria (60%)
10 7488 bp 67.28 19.34 91.47
qh_9_scaffold_2812
Order: Halobacteriales (70%)
10 7173 bp 67.77 23.87 93.94
qh_9_scaffold_1244
Order: Halobacteriales (90%)
10 6122 bp 65.94 23.75 95.21
qh_9_scaffold_4321
Class: Halobacteria (80%)
10 7893 bp 66.78 26.44 80.31
qh_9_scaffold_875
Class: Halobacteria (80%)
10 8317 bp 67.24 18.59 95.08
qh_9_scaffold_1272
Order: Halobacteriales (70%)
10 6050 bp 67.27 22.68 94.86
qh_9_scaffold_11097
Order: Halobacteriales (77.78%)
9 6337 bp 63.45 18.57 83.37
qh_9_scaffold_2057
Order: Halobacteriales (66.67%)
9 6404 bp 67.80 22.31 95.14
qh_9_scaffold_5587
Class: Halobacteria (77.78%)
9 4198 bp 57.12 20.89 93.90
qh_9_scaffold_1736
Order: Halobacteriales (55.56%)
9 5139 bp 67.70 24.05 93.23
qh_9_scaffold_3180
Order: Halobacteriales (77.78%)
9 5000 bp 67.98 21.94 97.32
qh_9_scaffold_1416
Class: Halobacteria (77.78%)
9 8837 bp 65.92 25.30 90.95
qh_9_scaffold_1278
Class: Halobacteria (66.67%)
9 6036 bp 66.58 23.74 91.35
qh_9_scaffold_3629
Order: Halobacteriales (55.56%)
9 7577 bp 68.26 23.24 88.49
qh_9_scaffold_1739
Class: Halobacteria (88.89%)
9 7205 bp 70.81 22.76 93.68
qh_9_scaffold_2134
Order: Halobacteriales (55.56%)
9 6686 bp 66.66 23.47 89.96
qh_9_scaffold_5255
Class: Halobacteria (55.56%)
9 5579 bp 67.43 22.90 93.03
qh_9_scaffold_5050
Class: Halobacteria (88.89%)
9 4712 bp 64.09 20.54 78.76
qh_9_scaffold_747
Order: Halobacteriales (77.78%)
9 8316 bp 66.20 24.01 95.92
qh_9_scaffold_5916
Class: Halobacteria (77.78%)
9 5704 bp 67.01 24.93 92.25
qh_9_scaffold_1559
Class: Halobacteria (88.89%)
9 6165 bp 67.87 22.97 96.79
qh_9_scaffold_1168
Class: Halobacteria (77.78%)
9 6329 bp 61.64 14.88 86.89
qh_9_scaffold_1657
Class: Halobacteria (88.89%)
9 8068 bp 66.06 23.40 86.49
qh_9_scaffold_3250
Class: Halobacteria (77.78%)
9 6732 bp 64.65 22.02 90.64
qh_9_scaffold_822
Order: Halobacteriales (88.89%)
9 10877 bp 66.89 23.76 90.96
qh_9_scaffold_1383
Class: Halobacteria (66.67%)
9 5779 bp 53.71 13.91 71.90
qh_9_scaffold_2584
Class: Halobacteria (77.78%)
9 5884 bp 57.83 13.07 75.82
qh_9_scaffold_2454
Order: Halobacteriales (55.56%)
9 5337 bp 63.71 21.92 88.42
qh_9_scaffold_6648
Order: Halobacteriales (50%)
8 5726 bp 65.11 20.75 73.56
qh_9_scaffold_2589
Order: Halobacteriales (50%)
8 8157 bp 66.11 20.00 82.27
qh_9_scaffold_1110
Order: Halobacteriales (50%)
8 8606 bp 64.55 21.35 97.75
Displaying items 51-100 of 247 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.