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QH_9_Viridiplantae_55_6

QH_9_Eukaryota_55_6

In projects: QH_9

Consensus taxonomy: Eukaryota

Taxonomy override: Eukaryote

Metagenomic Context

Parent: QH_9_UNK

Properties

Avg. coverage: 5.72 Longest contig: 4.41 Kbp Bin length: 1.43 Mbp GC content: 54.59 %

Contigs count: 890 Features count: 1610 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 14 / 55 MC: 1 BSCG 8 / 51 MC: 4 ASCG 8 / 38 MC: 1

Displaying items 151-200 of 890 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
qh_9_scaffold_26491 Species: Ostreococcus tauri (50%)	2	2139 bp	47.45	4.86	45.58
qh_9_scaffold_20834 Species: Chlamydomonas reinhardtii (50%)	2	1186 bp	59.78	6.83	92.33
qh_9_scaffold_24311 Species: Ostreococcus 'lucimarinus' (50%)	2	1062 bp	55.46	6.21	67.51
qh_9_scaffold_23310 Species: Micromonas sp. RCC299 (50%)	2	1094 bp	57.77	5.94	97.08
qh_9_scaffold_15075 Species: Chlorella pyrenoidosa (50%)	2	1469 bp	53.85	5.58	87.61
qh_9_scaffold_21714 Species: Micromonas pusilla (50%)	2	1152 bp	59.29	6.25	69.01
qh_9_scaffold_15307 Species: Micromonas pusilla (50%)	2	1453 bp	49.62	5.16	64.62
qh_9_scaffold_5829 Species: Chlorella variabilis (50%)	2	2621 bp	56.81	5.53	94.89
qh_9_scaffold_9940 Species: Amborella trichopoda (50%)	2	1905 bp	54.65	6.19	82.36
qh_9_scaffold_10008 Species: Tetraselmis sp. GSL018 (100%)	2	2488 bp	51.21	4.30	100.56
qh_9_scaffold_14365 Species: Selaginella moellendorffii (50%)	2	1517 bp	58.14	5.67	67.63
qh_9_scaffold_25909 Species: Micromonas pusilla (50%)	2	1013 bp	50.84	7.50	61.01
qh_9_scaffold_9251 Species: Tetraselmis sp. GSL018 (50%)	2	1987 bp	56.67	5.18	61.00
qh_9_scaffold_15499 Species: Ostreococcus 'lucimarinus' (50%)	2	1442 bp	53.68	6.03	73.65
qh_9_scaffold_42141 Species: Ostreococcus 'lucimarinus' (50%)	2	1292 bp	58.13	5.88	64.32
qh_9_scaffold_7388 Species: Micromonas pusilla (50%)	2	2278 bp	55.84	5.71	62.82
qh_9_scaffold_25680 Species: Setaria italica (50%)	2	1020 bp	56.57	5.10	59.12
qh_9_scaffold_9484 Species: Bathycoccus prasinos (50%)	2	1958 bp	57.10	4.85	79.98
qh_9_scaffold_11352 Species: Ostreococcus tauri (50%)	2	1757 bp	54.41	5.35	74.62
qh_9_scaffold_15082 Species: Phaseolus vulgaris (50%)	2	1468 bp	56.61	6.20	99.32
qh_9_scaffold_20129 Species: Bathycoccus prasinos (50%)	2	1214 bp	55.27	6.26	100.58
qh_9_scaffold_21533 Species: Tetraselmis sp. GSL018 (100%)	2	1159 bp	59.28	4.66	67.04
qh_9_scaffold_30616 Species: Chlorella variabilis (50%)	2	1305 bp	53.26	6.51	100.46
qh_9_scaffold_15500 Species: Bathycoccus prasinos (50%)	2	1442 bp	58.04	5.83	93.41
qh_9_scaffold_21303 Species: Musa acuminata (50%)	2	1168 bp	51.80	6.68	97.09
qh_9_scaffold_13450 Species: Tetraselmis sp. GSL018 (50%)	2	1581 bp	56.93	6.83	69.45
qh_9_scaffold_20846 Species: Picea sitchensis (50%)	2	1185 bp	53.33	4.89	68.86
qh_9_scaffold_9719 Species: Tetraselmis sp. GSL018 (100%)	2	3464 bp	55.43	5.83	96.74
qh_9_scaffold_20364 Species: Coccomyxa subellipsoidea (50%)	2	1787 bp	52.66	6.94	85.62
qh_9_scaffold_23634 Species: Volvox carteri (50%)	2	1084 bp	50.00	5.63	94.37
qh_9_scaffold_31824 Species: Selaginella moellendorffii (50%)	2	1540 bp	55.91	5.06	78.51
qh_9_scaffold_15968 Species: Ostreococcus tauri (50%)	2	1412 bp	52.34	5.59	90.09
qh_9_scaffold_12533 Species: Monoraphidium neglectum (50%)	2	1651 bp	57.84	6.30	80.86
qh_9_scaffold_17372 Species: Monoraphidium neglectum (50%)	2	1339 bp	57.65	9.11	43.24
qh_9_scaffold_17602 Species: Chlorella variabilis (50%)	2	1328 bp	60.62	5.95	101.88
qh_9_scaffold_20599 Species: Tetraselmis sp. GSL018 (50%)	2	1195 bp	58.16	6.44	99.67
qh_9_scaffold_17374 Species: Micromonas pusilla (50%)	2	1339 bp	54.14	6.42	78.86
qh_9_scaffold_20139 Species: Hordeum vulgare (50%)	2	1214 bp	51.40	5.44	60.79
qh_9_scaffold_31848 Species: Monoraphidium neglectum (50%)	2	1833 bp	46.92	5.46	50.90
qh_9_scaffold_6917 Species: Physcomitrella patens (50%)	2	2371 bp	54.28	6.03	73.26
qh_9_scaffold_26152 Species: Coccomyxa subellipsoidea (50%)	2	1006 bp	54.97	5.96	58.15
qh_9_scaffold_20140 Species: Ostreococcus 'lucimarinus' (50%)	2	1214 bp	60.30	5.02	91.19
qh_9_scaffold_21963 Species: Ostreococcus 'lucimarinus' (50%)	2	1143 bp	47.16	6.39	62.73
qh_9_scaffold_18069 Species: Setaria italica (50%)	2	1305 bp	52.95	5.44	74.71
qh_9_scaffold_21965 Species: Ostreococcus tauri (50%)	2	2124 bp	56.87	6.64	42.37
qh_9_scaffold_28635 Species: Micromonas sp. RCC299 (50%)	2	1553 bp	57.12	5.60	89.83
qh_9_scaffold_9268 Species: Ostreococcus 'lucimarinus' (50%)	2	1986 bp	59.72	5.14	83.23
qh_9_scaffold_11367 Species: Micromonas pusilla (50%)	2	1755 bp	52.54	6.21	81.54
qh_9_scaffold_13231 Species: Micromonas pusilla (50%)	2	1597 bp	59.11	5.89	69.32
qh_9_scaffold_19453 Species: Micromonas sp. RCC299 (50%)	2	1241 bp	58.50	5.32	95.49

Displaying items 151-200 of 890 in total

QH_9_Viridiplantae_55_6

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

QH_9_Viridiplantae_55_6

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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