ggKbase home page

qs_1_scaffold_1683_9

Organism: QS_1_Halobacteriales_64_11

partial RP 27 / 55 MC: 3 BSCG 20 / 51 MC: 1 ASCG 23 / 38 MC: 1
Location: 8876..9871

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1P5_HALMD similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 331.0
  • Bit_score: 535
  • Evalue 3.60e-149
transcription factor TFIIB cyclin-related protein similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 331.0
  • Bit_score: 535
  • Evalue 1.00e-149
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 331.0
  • Bit_score: 535
  • Evalue 5.10e-149

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halomicrobium mukohataei → Halomicrobium → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 996
ATGAAAGACACGGACACACGGACGCGAACGCGACCTCGACCTGCAGCCTCCGAGCGCGAGAACGAGAGCGAAACCGAAACGACCGACGAGCGCGATGTGCTCGACTGTCCCGAATGTGGCGGGAAGATCGTCGCCGACAGCGGTCACGGCGAGACGGTCTGTTCGGATTGTGGGCTCGTCGTCGCCGAAAACGAGATCGACCGCGGGCCCGAGTGGCGCGCGTTCGACTCACGCGAGAAGAGCCAGAAGAGCCGGGTCGGCGCACCGACGACGAAGATGATGCACGACAAGGGCCTGTCGACGAACATCGACTGGCGCGACAAGGACGCCTACGGTCGCTCGCTTGGCTCCCGTCAGCGCGCGAAGATGCAACGCCTGCGCAAGTGGAACGAGCGCTTCCGAACTCGGGACTCGAAGGACAGGAATCTCAAACAGGCCTTGGGTGAGATCGACCGAATGGCCTCCGCGCTCGGGCTGCCCGAGACGGTACGCGAAACGGCGAGCGTGATCTACCGCCGGGCGCTCGACGAGAACCTCCTGCCCGGGCGATCGATCGAGGGCGTCTCGACCTCTGCAGTGTACGCTGCCGCCAGGCAGGCCGGCGTGCCCCGCAGTCTCGACGAGATCACCGACGTCTCCCGGGTCGAAAAGAGCGAGATCGCCCGCACGTATCGCTACGTCGTGCGCGAACTCGGCTTGGAGATCCAGCCCGCTGATCCCGAGAGCTACGTCCCCCGCTTCGCGAGCGCGCTCGACGTCTCCGACGAGGCCGAAGGCCGCGCTCGCCAACTGCTTCGAAACGCGAAAGAACAGGGCGTCCACAGCGGCAAGAGTCCAGTTGGACTGGCCGCCGCCGCCGTCTACGCTGCCGCCCTGTTGACCAACGAGAAGACCACTCAGGCCGCCGTGAGCGAGGTCGCCGACATCTCGGAAGTCACGATCCGTAACCGATATCACGAACTGCTCGAAGCCGAGCAAGACTTGCAGTTGGCCTGA
PROTEIN sequence
Length: 332
MKDTDTRTRTRPRPAASERENESETETTDERDVLDCPECGGKIVADSGHGETVCSDCGLVVAENEIDRGPEWRAFDSREKSQKSRVGAPTTKMMHDKGLSTNIDWRDKDAYGRSLGSRQRAKMQRLRKWNERFRTRDSKDRNLKQALGEIDRMASALGLPETVRETASVIYRRALDENLLPGRSIEGVSTSAVYAAARQAGVPRSLDEITDVSRVEKSEIARTYRYVVRELGLEIQPADPESYVPRFASALDVSDEAEGRARQLLRNAKEQGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSEVADISEVTIRNRYHELLEAEQDLQLA*