ggKbase home page

qs_1_scaffold_1664_16

Organism: QS_1_Euk_56_21

megabin RP 45 / 55 MC: 34 BSCG 41 / 51 MC: 19 ASCG 27 / 38 MC: 10
Location: comp(10795..11835)

Top 3 Functional Annotations

Value Algorithm Source
Histone deacetylase {ECO:0000256|PIRNR:PIRNR037913}; EC=3.5.1.98 {ECO:0000256|PIRNR:PIRNR037913};; TaxID=13333 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 337.0
  • Bit_score: 527
  • Evalue 1.90e-146
Uncharacterized protein n=1 Tax=Amborella trichopoda RepID=U5DE08_AMBTC similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 335.0
  • Bit_score: 526
  • Evalue 2.30e-146
histone deacetylase similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 324.0
  • Bit_score: 208
  • Evalue 3.00e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Amborella trichopoda → Amborella → Amborellales → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1041
GTGTACAAGCCCGGCCGGATGACATTCAATGAGATGAGTAAATTCCACTCGGACGAGTACATCGACTTCTTGCGCTGCATCACCCCCGAAAACCAGCACGAGCACAGCCGCCAGTTGAAGAAGTTCAACGTTGGCGAGGACTGCCCCGTATTCGATGGGCTGTACGAATACTGCCAAACCTACGGTGGCGGTAGCGTTGGCGCCGCGCACAAGCTGAATGAGAAGACGGTCGATTGCGCTGTCAATTGGGCAGGTGGGTTGCACCACGCGAAAAAGTCCGAAGCCAGCGGCTTCTGCTACGTGAACGACATCGTTCTTGCCATTCTCGAGCTGCTCAAGTACCACCAGCGGGTGCTGTACGTGGACATTGACATCCACCATGGTGACGGCGTGGAAGAGGCTTTCTTCACGACCGATCGTGTGATGACTGTGTCGTTCCACAAGTTCGGTGAGGGCTACTTCCCTGGTACCGGGCACCAGGATGACATCGGCTACGGCGACGGCAAGCACTACGCGTTGAATGTGCCGTTGAACGATGGCATCGACGACAAGTCATATGATGATCTCTTCAAGCCCATCATGCGGAAGGTGATGGAGAAGTTCCGACCGGATGCGGTGGTCTTCCAGAGCGGAACCGACTCGCTTAGCGGTGACAGACTCGGATGCTTCAATCTGTCGATCAAAGGCCACTCCAACTGCTTGACATTTATGCGAAGCTTCGACGTACCACTGTTGTTGCTGGGCGGAGGCGGATATACGATACGGAACGTGGCGCGATGCTGGTGCTACGAGACAGCGTGCTTGGCCGGAGTTGAGTTGGACGACAAGCTGCCGTACAACGACTATTATGCATACTTCGGGCCAAACTTCAGATTGCACATCCAGCCATCAAACATGCTGAACAGGAATGCGCAGAAAGACTTGGAGAGCACGCGCAACACGCTGCTGGCGCGGCTAGGGGAGCTGGAGCCAGCGCCCTCGGTGCCGTTTCAACCGACGCCAGGAGACACGGTGAGAGAAACAGCGCACACAACGTCATAA
PROTEIN sequence
Length: 347
VYKPGRMTFNEMSKFHSDEYIDFLRCITPENQHEHSRQLKKFNVGEDCPVFDGLYEYCQTYGGGSVGAAHKLNEKTVDCAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFFTTDRVMTVSFHKFGEGYFPGTGHQDDIGYGDGKHYALNVPLNDGIDDKSYDDLFKPIMRKVMEKFRPDAVVFQSGTDSLSGDRLGCFNLSIKGHSNCLTFMRSFDVPLLLLGGGGYTIRNVARCWCYETACLAGVELDDKLPYNDYYAYFGPNFRLHIQPSNMLNRNAQKDLESTRNTLLARLGELEPAPSVPFQPTPGDTVRETAHTTS*