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qs_1_scaffold_1131_7

Organism: QS_1_Actinobacteria_72_13

near complete RP 47 / 55 BSCG 47 / 51 MC: 4 ASCG 13 / 38 MC: 1
Location: 5869..6462

Top 3 Functional Annotations

Value Algorithm Source
RNA methyltransferase, RsmD family (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 189.0
  • Bit_score: 153
  • Evalue 6.50e-35
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:AFR05885.1}; EC=2.1.1.- {ECO:0000313|EMBL:AFR05885.1};; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Noca similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 189.0
  • Bit_score: 153
  • Evalue 3.20e-34
hypothetical protein n=1 Tax=Nocardiopsis RepID=UPI0003450BD8 similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 196.0
  • Bit_score: 156
  • Evalue 2.70e-35

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Taxonomy

Nocardiopsis alba → Nocardiopsis → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGCTGCGTGTGATCGCCGGGGCCGCCAAGGGGCGGCGGCTGCGCACCACCGGGGGGCGGGCAACGCGCCCCATGGGCGAGCGTATGCGCGAGGCCCTGTTCTCCAGCCTGACGCCGGCGCTAAGCGACGCGGTCGTGCTGGATCTATGGGCCGGCTCGGGGTCGCTGGCGATCGAGGCCCTGTCGCGCGGGGCGCGGCGGGCGGTGCTGGTCGAGCGCCAACGCGCCGCGCTGGCTGTGTTGCGCGACAACGTCACGGCGTGTGGCTTTGCCCCCCGCGCCCGTGTGGTCGCCGACGACGTGGCGGCGTTCGCCCAGCGCGCCGACGACGGGCCCTTCGACGTGGTCCTGGCCGATCCGCCCTACGCCATCGCCATCGAGCGTGTGTGGGCGGTCCTGGGGCGGCTGCACGCCGGCGGGGCGGTGACCGGCGACGCCGAGGTCGTGCTGCACCGTCCCGCTCGCGAGCCCGTGGCCGAGCCGCCGGCGCCATTGGCGCTGCAGCGCGTGCGCCCGTACGGTGACGCCGCCCTGTGGCGGTTGAGCGTGGCGGGCCGCGCCGCCCCGGTCGAGGATGGGCGCGGCGATCGCTAG
PROTEIN sequence
Length: 198
MLRVIAGAAKGRRLRTTGGRATRPMGERMREALFSSLTPALSDAVVLDLWAGSGSLAIEALSRGARRAVLVERQRAALAVLRDNVTACGFAPRARVVADDVAAFAQRADDGPFDVVLADPPYAIAIERVWAVLGRLHAGGAVTGDAEVVLHRPAREPVAEPPAPLALQRVRPYGDAALWRLSVAGRAAPVEDGRGDR*