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qs_1_scaffold_2527_24

Organism: QS_1_Actinobacteria_72_13

near complete RP 47 / 55 BSCG 47 / 51 MC: 4 ASCG 13 / 38 MC: 1
Location: comp(19611..20276)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Dietzia sp. UCD-THP RepID=UPI0003702039 similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 216.0
  • Bit_score: 188
  • Evalue 7.30e-45
RNA polymerase sigma factor {ECO:0000313|EMBL:KKS98967.1}; TaxID=1618578 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_43_14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 218.0
  • Bit_score: 191
  • Evalue 9.20e-46
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 217.0
  • Bit_score: 189
  • Evalue 9.20e-46

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Taxonomy

GWB1_OP11_43_14 → Woesebacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 666
GTGGTCAACATCGCCGCGAAGTTCGCCCGCCGCTCCCGCCTGCCCCTGGAGGAGCTGATTCAGGAGGGCAACCTCGGGCTCATCCGGGCGGTGGAGAAGTTCGACTGGCGCCGTGGCTACAAGTTCTCGACCTACGCCACGTGGTGGATCCGCCAGGCCATCCAGCGGGGCGCGGCGCAAAGCGAGCGCACCATCCGGCTGCCGGTGGCGCTCCACGAGGGACTGATCATGGTGCGCGCCGCGGCGGCCCGCATCGAGTCCGAGACCGGCCGCGAGCCCACCATCGCCGAGCTCGCCGAGGCCACCCGCATGAGCGAGGACAAGGTGCGCCGGGCTTTGGAGGGCGACCACTCGGTGACGTCGCTGGACCGGCCCGTGGGCCACGACGAGGACGCCAGCGGACTGGGCGACTTCGTGGCCATCGCCGATGACACGCCCGACGACGAGGTCGTTGACCGCGCCTTTTTGGGCGAGGTCGTCGAGCTGGCCCGCCACCGGCTGGACGAGCGCAGCTGGTATGTCCTCACGCGCCGCTTCGGCCTCGACGGCGACCAGGCGTGCACCCTGGACCAACTCGGCAAAGAGCTGGGCGTCAGCCGCGAGTCGGTGCGCAAGATCGAGCGTGAGGCCCTCGAGACGCTCCACGAGGAATTCTCCGCCGCCTAA
PROTEIN sequence
Length: 222
VVNIAAKFARRSRLPLEELIQEGNLGLIRAVEKFDWRRGYKFSTYATWWIRQAIQRGAAQSERTIRLPVALHEGLIMVRAAAARIESETGREPTIAELAEATRMSEDKVRRALEGDHSVTSLDRPVGHDEDASGLGDFVAIADDTPDDEVVDRAFLGEVVELARHRLDERSWYVLTRRFGLDGDQACTLDQLGKELGVSRESVRKIEREALETLHEEFSAA*