ggKbase home page

qs_1_scaffold_6101_1

Organism: QS_1_Bacteroidetes_Order_II__Incertae_sedis_64_9

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 453..1010

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor n=1 Tax=Salisaeta longa RepID=UPI0003B3C263 similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 184.0
  • Bit_score: 225
  • Evalue 4.50e-56
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 178.0
  • Bit_score: 218
  • Evalue 2.00e-54
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:ABC43762.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 178.0
  • Bit_score: 218
  • Evalue 1.00e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 558
ATGGCCCAGTACGACTTCGACACCGCGCTCGTGAAGCGGGCGCAATCGGGCGACGAGCGCGCCCGCGAGCAGCTTTTCGGCCAACTCGAGCCGCTCCTGCGGGCCTACTTCATCAAGCGCCTCGGCGAGCAGTCCGTGGTGGATGATCTCGTGCAGAACACGATGCTGCGCGTGCACGACGGGCTGGACGATCTGAATCGCACGGATCGGCTCAAGGCGTTTGCGATGAAGGCGGCGCTCTTTGAGGTGCAGGACTATTACCGGGGCCGCTACGACGCGAAAGAAAACCTGTACGATCCCGAACTGCCGCCGGAGCAGCCGGGCGGCGGGGCGCCAGTCGAGGCAAGCGTGGACGTGGAACGCGCCCTCGATACGCTCAAACCACAGGCGCGCCGCGTCATGGAGCTGCGCGAGCTGGGCTACAAATATAGAGAGATCGCCGAGGAGATGGACACGACGGAGGCCGCCATCAAGATGCGCGTCAAACGCGCCTTCGACAAGATGCGCGACGCGCTCCTTGCGGTGGTGCTGCTTTTGAGTCAAGCGCTCGGTGGGTAG
PROTEIN sequence
Length: 186
MAQYDFDTALVKRAQSGDERAREQLFGQLEPLLRAYFIKRLGEQSVVDDLVQNTMLRVHDGLDDLNRTDRLKAFAMKAALFEVQDYYRGRYDAKENLYDPELPPEQPGGGAPVEASVDVERALDTLKPQARRVMELRELGYKYREIAEEMDTTEAAIKMRVKRAFDKMRDALLAVVLLLSQALGG*