ggKbase home page

qs_1_scaffold_387_7

Organism: QS_1_Halobacteriales_64_48

near complete RP 32 / 55 MC: 5 BSCG 27 / 51 MC: 3 ASCG 34 / 38 MC: 1
Location: 4601..5593

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SYK3_NATMM similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 327.0
  • Bit_score: 499
  • Evalue 2.20e-138
transcription factor TFIIB cyclin-like protein similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 327.0
  • Bit_score: 499
  • Evalue 6.20e-139
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrial similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 327.0
  • Bit_score: 499
  • Evalue 3.10e-138

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Natrialba magadii → Natrialba → Natrialbales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 993
ATGACAGACACTCGATTCAGAACGCGATCAGAGCGCACCGACGAGCGCGGACAGAGCGAGGGCGAACGCACCGACCAGGACCAGCAGACGGAGATGACCTGCCCGGAGTGTGGCGGTCGGTTGATGACCGACGCCGAACACGGCGAGACCGTCTGTGAGGACTGCGGGCTGGTCGTCGAGGACGAGGCGGTCGATCGCGGCCCGGAGTGGCGCGCCTTCGACTCCCGGGAGAAGGACGAGAAGAGCCGGGTCGGCGCACCCACGACGAAGATGATGCACGACCAGGGCCTGTCGACCAACATCGACTGGCGCGACAAGGACGCCTACGGCAACACGCTCAGTTCGCGCCAGCGCGCGAAGATGCAACGGCTTCGCACTTGGGACGAGCGCTTCCGGACCCGGGATGCCAAGGAGAGGAATCTCAAGCAAGCGCTCGGCGAGATCGAGCGGATGGCGAGCGCCCTCGGACTGCCCGAGAACGTTCGCGAGACCGCGAGCGTGATCTACCGCCGAGCGCTCGACGAGGACCTCCTTCCGGGGCGGTCGATCGAGGCGATCGCGACGGCCTCGCTACACGCCGCGGCGCGTCAGGCCGGCGTGCCCCGCAGTATCGACGAGGTCGCCGACGTCAGCCGGATCGAACAGATGGAGTTCGAGCGGGCCTATCGCTACATCGTCCGTGAACTCGGCCTCGGGATCAAACCCGCGGACCCGACGAGTTACGTCGGCCGCTTCGCCTCCGATCTCGACGTCTCGGACGAGGTCGAACAGCGAGCGCGCGAACTGCTCGAAACCACGAAACGCGAGGGTGCTCACAGCGGCAAGAGTCCCGTCGGACTCGCGGCCGCCGCGGTCTACGCCGCCGCCTTGCTCACCAACCAGCGGGTGACCCAGAGCGAGGTCAGCGAAATCGCGGACGTGAGCGAAGTCACGATCCGCAATCGCTACAAGGAACTCTTAGAGGTCGAAGGCGACGCACGAGCGATCGCCTGA
PROTEIN sequence
Length: 331
MTDTRFRTRSERTDERGQSEGERTDQDQQTEMTCPECGGRLMTDAEHGETVCEDCGLVVEDEAVDRGPEWRAFDSREKDEKSRVGAPTTKMMHDQGLSTNIDWRDKDAYGNTLSSRQRAKMQRLRTWDERFRTRDAKERNLKQALGEIERMASALGLPENVRETASVIYRRALDEDLLPGRSIEAIATASLHAAARQAGVPRSIDEVADVSRIEQMEFERAYRYIVRELGLGIKPADPTSYVGRFASDLDVSDEVEQRARELLETTKREGAHSGKSPVGLAAAAVYAAALLTNQRVTQSEVSEIADVSEVTIRNRYKELLEVEGDARAIA*