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QS_1_Proteobacteria_63_7

In projects: QS_1

Consensus taxonomy: Proteobacteria  →  Bacteria

Taxonomy override: Proteobacteria

Metagenomic Context

Parent: QS_1_UNK

Properties

Avg. coverage: 7.30 Longest contig: 7.02 Kbp Bin length: 253.08 Kbp GC content: 63.33 %
Contigs count: 152 Features count: 320 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 5 / 55 BSCG 5 / 51 ASCG 0 / 38
Displaying items 51-100 of 152 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_1_scaffold_30127
Species: Achromobacter xylosoxidans (50%)
2 1062 bp 62.34 6.50 84.46
qs_1_scaffold_22068
Species: Hyalangium minutum (50%)
2 1903 bp 62.80 10.72 67.47
qs_1_scaffold_30826
Species: BJP_IG2157_Desulfuromonadales_56_134 (50%)
2 1040 bp 60.87 6.06 76.73
qs_1_scaffold_21610
Species: Sandaracinus amylolyticus (50%)
2 1407 bp 62.69 6.11 87.21
qs_1_scaffold_31522
Species: Mesorhizobium ciceri (50%)
2 1021 bp 60.14 8.52 104.31
qs_1_scaffold_31754
Species: Geobacter sp. M21 (50%)
2 1014 bp 61.64 4.83 89.94
qs_1_scaffold_20467
Species: CG_Delta_07 (50%)
2 1470 bp 66.12 4.63 89.39
qs_1_scaffold_24593
Species: CG_Delta_07 (50%)
2 1263 bp 63.50 5.86 71.50
qs_1_scaffold_15172
Species: Acidisphaera rubrifaciens (50%)
2 1873 bp 60.01 11.11 93.38
qs_1_scaffold_40437
Species: Sorangium cellulosum (50%)
2 1771 bp 62.00 5.48 71.99
qs_1_scaffold_7584
Species: Serratia marcescens (50%)
2 3116 bp 62.23 10.75 99.45
qs_1_scaffold_25549
Species: Thiorhodococcus drewsii (50%)
2 1223 bp 63.94 5.40 87.33
qs_1_scaffold_29941
Species: CG_Delta_07 (50%)
2 1067 bp 62.14 4.87 93.91
qs_1_scaffold_29259
Species: uncultured Thiohalocapsa sp. PB-PSB1 (50%)
2 1088 bp 65.07 7.63 92.37
qs_1_scaffold_22578
Species: Rhodopseudomonas palustris (50%)
2 1355 bp 66.20 6.20 100.07
qs_1_scaffold_20504
Species: Agrobacterium tumefaciens (50%)
2 1468 bp 65.67 7.29 92.17
qs_1_scaffold_30883
Species: GWA2_Rhodocyclales_65_20_curated (50%)
2 1038 bp 59.54 5.01 79.48
qs_1_scaffold_27893
Species: Cystobacter violaceus (50%)
2 1134 bp 62.26 4.94 91.80
qs_1_scaffold_25821
Species: Mesorhizobium plurifarium (50%)
2 1212 bp 62.95 6.11 96.04
qs_1_scaffold_39517
Species: Pseudoalteromonas luteoviolacea (50%)
2 1664 bp 63.10 6.55 84.74
qs_1_scaffold_21214
Species: Luminiphilus syltensis (50%)
2 1427 bp 62.30 6.03 95.02
qs_1_scaffold_25594
Species: Methylohalobius crimeensis (50%)
2 1221 bp 61.59 4.67 100.25
qs_1_scaffold_17995
Species: Cupriavidus taiwanensis (50%)
2 1633 bp 59.71 7.04 78.26
qs_1_scaffold_8789
Species: Alcanivorax pacificus (50%)
2 2805 bp 65.17 7.59 90.05
qs_1_scaffold_28136
Species: Myxococcus fulvus (50%)
2 2217 bp 65.45 6.13 85.39
qs_1_scaffold_35293
Species: Myxococcus fulvus (50%)
2 2047 bp 63.56 5.85 99.07
qs_1_scaffold_7414
Species: Allochromatium vinosum (50%)
2 3158 bp 64.47 11.08 99.56
qs_1_scaffold_33331
Species: Geobacter bemidjiensis (50%)
2 2403 bp 65.75 7.45 79.28
qs_1_scaffold_20543
Species: Desulfovibrio africanus (50%)
2 2175 bp 62.11 6.76 72.00
qs_1_scaffold_29533
Species: CG_Delta_07 (50%)
2 1080 bp 65.93 5.46 101.39
qs_1_scaffold_8114
Species: Burkholderia sp. USM B20 (50%)
2 2965 bp 65.43 8.30 100.07
qs_1_scaffold_12944
Species: Bordetella bronchiseptica (50%)
2 2119 bp 61.11 6.32 84.38
qs_1_scaffold_30689
Species: Corallococcus coralloides (50%)
2 1044 bp 61.49 7.85 71.84
qs_1_scaffold_31383
Species: Plesiocystis pacifica (50%)
2 1891 bp 65.57 5.71 81.70
qs_1_scaffold_32415
Species: CSP1_8_Deltaproteobacteria (50%)
2 1827 bp 62.29 5.53 79.15
qs_1_scaffold_23326
Species: CG_Delta_07 (50%)
2 1319 bp 61.33 6.52 90.07
qs_1_scaffold_26323
Species: RBG_13_Deltaproteobacteria_61_14_curated (50%)
2 1193 bp 60.02 5.11 60.35
qs_1_scaffold_35460
Species: CG_Delta_07 (50%)
2 1584 bp 63.01 4.92 60.61
qs_1_scaffold_17347
Species: RIFOXYA1_FULL_Brevundimonas_67_7_curated (50%)
2 2609 bp 61.48 6.82 56.57
qs_1_scaffold_28408
Species: Sandaracinus amylolyticus (50%)
2 1117 bp 64.01 5.19 89.70
qs_1_scaffold_18966
Species: BJP_IG2102_Syntrophobacterales_60_12 (50%)
2 1567 bp 62.73 6.25 98.98
qs_1_scaffold_28183
Species: CG_Delta_07 (50%)
2 1124 bp 66.10 7.74 61.12
qs_1_scaffold_30948
Species: Halomonas sp. BC04 (50%)
2 1036 bp 65.15 5.41 71.53
qs_1_scaffold_29569
Species: Enterobacter sp. DC4 (50%)
2 1989 bp 65.46 7.64 87.33
qs_1_scaffold_32106
Species: Cystobacter fuscus (50%)
2 1005 bp 66.37 5.47 91.64
qs_1_scaffold_29574
Species: endosymbiont of unidentified scaly snail isolate Monju (50%)
2 1645 bp 63.16 4.68 66.20
qs_1_scaffold_21512
Species: Haliangium ochraceum (50%)
2 2614 bp 64.77 5.97 86.19
qs_1_scaffold_27967
Species: Phaeobacter gallaeciensis (50%)
2 1131 bp 61.98 6.01 88.33
qs_1_scaffold_32112
Species: Thioploca ingrica (50%)
2 1005 bp 66.17 8.96 85.07
qs_1_scaffold_28659
Species: delta proteobacterium NaphS2 (50%)
2 1108 bp 60.56 8.84 97.74
Displaying items 51-100 of 152 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.