ggKbase | organisms

QS_1_Proteobacteria_63_7

In projects: QS_1

Consensus taxonomy: Proteobacteria → Bacteria

Taxonomy override: Proteobacteria

Metagenomic Context

Parent: QS_1_UNK

Properties

Avg. coverage: 7.30 Longest contig: 7.02 Kbp Bin length: 253.08 Kbp GC content: 63.33 %

Contigs count: 152 Features count: 320 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 5 / 55 BSCG 5 / 51 ASCG 0 / 38

Displaying items 51-100 of 152 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
qs_1_scaffold_30127 Species: Achromobacter xylosoxidans (50%)	2	1062 bp	62.34	6.50	84.46
qs_1_scaffold_22068 Species: Hyalangium minutum (50%)	2	1903 bp	62.80	10.72	67.47
qs_1_scaffold_30826 Species: BJP_IG2157_Desulfuromonadales_56_134 (50%)	2	1040 bp	60.87	6.06	76.73
qs_1_scaffold_21610 Species: Sandaracinus amylolyticus (50%)	2	1407 bp	62.69	6.11	87.21
qs_1_scaffold_31522 Species: Mesorhizobium ciceri (50%)	2	1021 bp	60.14	8.52	104.31
qs_1_scaffold_31754 Species: Geobacter sp. M21 (50%)	2	1014 bp	61.64	4.83	89.94
qs_1_scaffold_20467 Species: CG_Delta_07 (50%)	2	1470 bp	66.12	4.63	89.39
qs_1_scaffold_24593 Species: CG_Delta_07 (50%)	2	1263 bp	63.50	5.86	71.50
qs_1_scaffold_15172 Species: Acidisphaera rubrifaciens (50%)	2	1873 bp	60.01	11.11	93.38
qs_1_scaffold_40437 Species: Sorangium cellulosum (50%)	2	1771 bp	62.00	5.48	71.99
qs_1_scaffold_7584 Species: Serratia marcescens (50%)	2	3116 bp	62.23	10.75	99.45
qs_1_scaffold_25549 Species: Thiorhodococcus drewsii (50%)	2	1223 bp	63.94	5.40	87.33
qs_1_scaffold_29941 Species: CG_Delta_07 (50%)	2	1067 bp	62.14	4.87	93.91
qs_1_scaffold_29259 Species: uncultured Thiohalocapsa sp. PB-PSB1 (50%)	2	1088 bp	65.07	7.63	92.37
qs_1_scaffold_22578 Species: Rhodopseudomonas palustris (50%)	2	1355 bp	66.20	6.20	100.07
qs_1_scaffold_20504 Species: Agrobacterium tumefaciens (50%)	2	1468 bp	65.67	7.29	92.17
qs_1_scaffold_30883 Species: GWA2_Rhodocyclales_65_20_curated (50%)	2	1038 bp	59.54	5.01	79.48
qs_1_scaffold_27893 Species: Cystobacter violaceus (50%)	2	1134 bp	62.26	4.94	91.80
qs_1_scaffold_25821 Species: Mesorhizobium plurifarium (50%)	2	1212 bp	62.95	6.11	96.04
qs_1_scaffold_39517 Species: Pseudoalteromonas luteoviolacea (50%)	2	1664 bp	63.10	6.55	84.74
qs_1_scaffold_21214 Species: Luminiphilus syltensis (50%)	2	1427 bp	62.30	6.03	95.02
qs_1_scaffold_25594 Species: Methylohalobius crimeensis (50%)	2	1221 bp	61.59	4.67	100.25
qs_1_scaffold_17995 Species: Cupriavidus taiwanensis (50%)	2	1633 bp	59.71	7.04	78.26
qs_1_scaffold_8789 Species: Alcanivorax pacificus (50%)	2	2805 bp	65.17	7.59	90.05
qs_1_scaffold_28136 Species: Myxococcus fulvus (50%)	2	2217 bp	65.45	6.13	85.39
qs_1_scaffold_35293 Species: Myxococcus fulvus (50%)	2	2047 bp	63.56	5.85	99.07
qs_1_scaffold_7414 Species: Allochromatium vinosum (50%)	2	3158 bp	64.47	11.08	99.56
qs_1_scaffold_33331 Species: Geobacter bemidjiensis (50%)	2	2403 bp	65.75	7.45	79.28
qs_1_scaffold_20543 Species: Desulfovibrio africanus (50%)	2	2175 bp	62.11	6.76	72.00
qs_1_scaffold_29533 Species: CG_Delta_07 (50%)	2	1080 bp	65.93	5.46	101.39
qs_1_scaffold_8114 Species: Burkholderia sp. USM B20 (50%)	2	2965 bp	65.43	8.30	100.07
qs_1_scaffold_12944 Species: Bordetella bronchiseptica (50%)	2	2119 bp	61.11	6.32	84.38
qs_1_scaffold_30689 Species: Corallococcus coralloides (50%)	2	1044 bp	61.49	7.85	71.84
qs_1_scaffold_31383 Species: Plesiocystis pacifica (50%)	2	1891 bp	65.57	5.71	81.70
qs_1_scaffold_32415 Species: CSP1_8_Deltaproteobacteria (50%)	2	1827 bp	62.29	5.53	79.15
qs_1_scaffold_23326 Species: CG_Delta_07 (50%)	2	1319 bp	61.33	6.52	90.07
qs_1_scaffold_26323 Species: RBG_13_Deltaproteobacteria_61_14_curated (50%)	2	1193 bp	60.02	5.11	60.35
qs_1_scaffold_35460 Species: CG_Delta_07 (50%)	2	1584 bp	63.01	4.92	60.61
qs_1_scaffold_17347 Species: RIFOXYA1_FULL_Brevundimonas_67_7_curated (50%)	2	2609 bp	61.48	6.82	56.57
qs_1_scaffold_28408 Species: Sandaracinus amylolyticus (50%)	2	1117 bp	64.01	5.19	89.70
qs_1_scaffold_18966 Species: BJP_IG2102_Syntrophobacterales_60_12 (50%)	2	1567 bp	62.73	6.25	98.98
qs_1_scaffold_28183 Species: CG_Delta_07 (50%)	2	1124 bp	66.10	7.74	61.12
qs_1_scaffold_30948 Species: Halomonas sp. BC04 (50%)	2	1036 bp	65.15	5.41	71.53
qs_1_scaffold_29569 Species: Enterobacter sp. DC4 (50%)	2	1989 bp	65.46	7.64	87.33
qs_1_scaffold_32106 Species: Cystobacter fuscus (50%)	2	1005 bp	66.37	5.47	91.64
qs_1_scaffold_29574 Species: endosymbiont of unidentified scaly snail isolate Monju (50%)	2	1645 bp	63.16	4.68	66.20
qs_1_scaffold_21512 Species: Haliangium ochraceum (50%)	2	2614 bp	64.77	5.97	86.19
qs_1_scaffold_27967 Species: Phaeobacter gallaeciensis (50%)	2	1131 bp	61.98	6.01	88.33
qs_1_scaffold_32112 Species: Thioploca ingrica (50%)	2	1005 bp	66.17	8.96	85.07
qs_1_scaffold_28659 Species: delta proteobacterium NaphS2 (50%)	2	1108 bp	60.56	8.84	97.74

Displaying items 51-100 of 152 in total

QS_1_Proteobacteria_63_7

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

QS_1_Proteobacteria_63_7

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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