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QS_2_UNK

In projects: QS_2  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 27.84 Longest contig: 286.04 Kbp Bin length: 41.26 Mbp GC content: 59.97 %
Contigs count: 14256 Features count: 54073 rRNAs count: 12 tRNAs count: 473

Genome completeness

megabin RP 47 / 55 MC: 37 BSCG 45 / 51 MC: 38 ASCG 38 / 38 MC: 38
Displaying items 551-600 of 14256 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_2_scaffold_10614 3 1552 bp 60.63 18.81 41.75
qs_2_scaffold_15196
Species: Salinibacter ruber (50%)
2 1135 bp 61.85 19.30 41.76
qs_2_scaffold_20249
Species: Tolypothrix bouteillei (50%)
2 1608 bp 49.38 4.91 41.79
qs_2_scaffold_16846 2 1033 bp 63.41 9.29 41.82
qs_2_scaffold_16850
Species: Halococcus hamelinensis (50%)
2 1033 bp 62.92 28.17 41.82
qs_2_scaffold_13696
Species: Drosophila melanogaster (50%)
2 1248 bp 52.40 5.85 41.83
qs_2_scaffold_14525 2 1183 bp 57.57 9.81 41.84
qs_2_scaffold_16755
Species: Haloarcula hispanica (100%)
1 1038 bp 59.34 201.83 41.91
qs_2_scaffold_9663 2 2863 bp 53.37 7.09 41.91
qs_2_scaffold_1275 9 6793 bp 47.48 8.52 42.00
qs_2_scaffold_8317
Order: Halobacteriales (66.67%)
3 1885 bp 59.26 44.88 42.02
qs_2_scaffold_29173
Species: Natronomonas moolapensis (50%)
2 1162 bp 72.03 112.48 42.08
qs_2_scaffold_20616
Species: Haloarcula vallismortis (50%)
2 1577 bp 53.90 7.74 42.23
qs_2_scaffold_14788
Species: Salinibacter ruber (100%)
2 1164 bp 62.63 14.43 42.27
qs_2_scaffold_17056
Species: Halalkalicoccus jeotgali (50%)
2 1021 bp 68.66 48.38 42.31
qs_2_scaffold_9360 4 1715 bp 52.19 8.16 42.33
qs_2_scaffold_724 11 9421 bp 50.44 7.43 42.34
qs_2_scaffold_13359
Species: halophilic archaeon DL31 (50%)
2 1275 bp 50.04 9.41 42.35
qs_2_scaffold_9303
Genus: Natronomonas (66.67%)
3 2415 bp 68.61 80.70 42.36
qs_2_scaffold_14664 3 1172 bp 59.73 7.51 42.41
qs_2_scaffold_14439 1 1188 bp 54.38 6.57 42.42
qs_2_scaffold_15088
Species: Haloarcula marismortui (100%)
1 1144 bp 53.50 7.52 42.48
qs_2_scaffold_13603
Species: Haloarcula marismortui (50%)
2 2365 bp 54.80 16.32 42.49
qs_2_scaffold_22046
Species: Haloarcula californiae (50%)
2 1659 bp 52.56 5.30 42.50
qs_2_scaffold_14179 1 1207 bp 49.13 6.79 42.50
qs_2_scaffold_23526
Species: Halorubrum sp. AJ67 (100%)
2 1785 bp 50.92 13.00 42.52
qs_2_scaffold_12858
Class: Oscillatoriophycideae (60%)
5 2631 bp 41.70 77.08 42.53
qs_2_scaffold_13424
Species: Rhodothermus marinus (50%)
2 1269 bp 61.62 14.26 42.55
qs_2_scaffold_15208 2 1134 bp 51.15 8.11 42.59
qs_2_scaffold_15992
Species: Halococcus morrhuae (50%)
2 1084 bp 62.08 20.66 42.62
qs_2_scaffold_25628
Species: Candidatus Halobonum tyrrellensis (50%)
2 1091 bp 68.01 75.99 42.62
qs_2_scaffold_9601
Phylum: Cyanobacteria (60%)
5 2941 bp 53.83 76.16 42.64
qs_2_scaffold_9873 2 1645 bp 57.14 8.09 42.67
qs_2_scaffold_9270
Species: Candidatus Halobonum tyrrellensis (50%)
2 1729 bp 72.53 9.49 42.68
qs_2_scaffold_16982
Species: Halococcus thailandensis (100%)
1 1025 bp 69.76 7.61 42.73
qs_2_scaffold_16734
Species: Halonotius sp. J07HN6 (100%)
1 1039 bp 62.27 7.60 42.73
qs_2_scaffold_15460
Species: Halogranum salarium (50%)
2 1118 bp 65.56 52.68 42.75
qs_2_scaffold_16879
Species: Natronomonas pharaonis (100%)
1 1031 bp 68.28 28.32 42.77
qs_2_scaffold_16054
Genus: Natronomonas (66.67%)
3 1080 bp 69.26 43.24 42.78
qs_2_scaffold_11039
Species: Halococcus salifodinae (66.67%)
3 2559 bp 67.64 128.57 42.79
qs_2_scaffold_11084 1 1500 bp 44.73 60.93 42.80
qs_2_scaffold_12572
Species: Natronomonas pharaonis (66.67%)
3 2123 bp 62.13 99.72 42.82
qs_2_scaffold_6582 3 2256 bp 53.06 7.14 42.82
qs_2_scaffold_9979
Species: Halococcus saccharolyticus (50%)
2 1630 bp 57.61 30.25 42.88
qs_2_scaffold_6768
Species: Mycobacterium nebraskense (50%)
2 2213 bp 52.42 6.37 42.97
qs_2_scaffold_16368 2 1061 bp 63.90 9.71 42.98
qs_2_scaffold_6380
Species: Pseudomonas sp. HPB0071 (50%)
2 2310 bp 49.09 14.85 42.99
qs_2_scaffold_15913 2 1088 bp 57.08 7.35 43.01
qs_2_scaffold_14181
Order: Halobacteriales (50%)
4 1800 bp 60.78 25.28 43.06
qs_2_scaffold_15310
Species: Natrialba taiwanensis (50%)
2 1128 bp 58.33 7.09 43.09
Displaying items 551-600 of 14256 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.