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qs_2_scaffold_4954_5

Organism: QS_2_Parcubacteria_47_6

partial RP 30 / 55 MC: 5 BSCG 31 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: comp(3362..3862)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYC1_FULL_RIF_OD1_09_52_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 159.0
  • Bit_score: 206
  • Evalue 2.70e-50
RNA polymerase sigma factor, sigma-70 family id=15190917 bin=GWC1_OP11_49_16_COMPLETE species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) similarity UNIREF
DB: UNIREF100
  • Identity: 30.6
  • Coverage: 160.0
  • Bit_score: 115
  • Evalue 5.90e-23
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 147.0
  • Bit_score: 84
  • Evalue 2.40e-14

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Taxonomy

RIFOXYC1_FULL_RIF_OD1_09_52_10_curated → RIF-OD1-9 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGCAGGAACGGAAAGACACAAAGCAAGAATTTGAACGCTTATTTGATGAGTATGTCGATGTGATCTACCGACTCTGCCTGTATAAGACAAGCAGCGAAGAGGTAGCACAAGAGCTTACCCAGGAGACGTTCTTGCGGCTGTGGGAACAATTTACTGCCGACAAAAACATTGAAAAGCCCAAACAGTATACGTACCAGATCGCCCGCAACCTGATTGTCGATCATTATAAGTCGGATCAGGCGGTCTCCTTGGATCAGCTGGAGGCAGACGGATACCAGCCGGAAGATGAGGAAAGCTTACCCGACATTGCGGCTGATGTGGAAATTGTAAAAAGAGCAATCCAGTCGCTTGATGAAGAGTTTCAGGAGGTCATGCAGATGCGGTTTGTTGCCGGCATGCGAGTGAAAGACATCGCTGAGACGTTAGACATATCGGAAAATCTCGCTTCGGTACGGATCTATCGGGGCAAAGAAAAGCTAGAAGACTTACTCACACAGTAA
PROTEIN sequence
Length: 167
MQERKDTKQEFERLFDEYVDVIYRLCLYKTSSEEVAQELTQETFLRLWEQFTADKNIEKPKQYTYQIARNLIVDHYKSDQAVSLDQLEADGYQPEDEESLPDIAADVEIVKRAIQSLDEEFQEVMQMRFVAGMRVKDIAETLDISENLASVRIYRGKEKLEDLLTQ*