ggKbase home page

qs_2_scaffold_537_4

Organism: QS_2_Salinibacter_ruber_64_27

partial RP 41 / 55 MC: 5 BSCG 35 / 51 MC: 3 ASCG 9 / 38 MC: 1
Location: 4713..5279

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHK9_RHOM4 similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 191.0
  • Bit_score: 138
  • Evalue 9.60e-30
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 180.0
  • Bit_score: 147
  • Evalue 3.40e-33
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AHG89921.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 180.0
  • Bit_score: 147
  • Evalue 1.70e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 567
ATGGACTGTTCCAACTCGAAGCAACGCGACCAGGACTGGGCCGAGCGCGTCCGACGTGGCGACCGGGAGGCGTTCGAAGCGCTCTTTCGCGCCTACGCCGATGACCTGTGCGGGTTTGCCGCTGGCCACGTCGGGGAGCAGGCCGCAGAGGACATCGTGCAGGACGTATTCTGCGATCTCTGGAATCGCCGCGCCGACTGGCGCCCACAGAGCGTGCGAGCGTACCTGTTCGGAGCCGTTCGCAACACCGCCCTCGACCGCCTCAAGCACCGTCGCGTCGAGCAGGCGTGGGAGGCGGAAGAGAAGTGCCGAGGCCGGCCCTCCGGGCTCGAATCGCCGGCGGACGTGCTCCAGCACCACGAACTCAAGCGAGCGATGCAACAGGCCGTCGAAGCGCTCCCGGAGCGGCGGCGCCTCGTCTATCGCATGGTGCGCCAGCAGGGCATGAGCTACGCGGAGACGGCCGAGGTCCTCGGCATCGCCCCGAAGACGGTCGAAAACCAGATGGGGCGTGCCCTGAAAACGCTCCGCGAACGGCTCTCGAAGTTTGCCTCGGCACTTCAGTAA
PROTEIN sequence
Length: 189
MDCSNSKQRDQDWAERVRRGDREAFEALFRAYADDLCGFAAGHVGEQAAEDIVQDVFCDLWNRRADWRPQSVRAYLFGAVRNTALDRLKHRRVEQAWEAEEKCRGRPSGLESPADVLQHHELKRAMQQAVEALPERRRLVYRMVRQQGMSYAETAEVLGIAPKTVENQMGRALKTLRERLSKFASALQ*