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QS_2_Salinibacter_ruber_64_27

In projects: QS_2

Consensus taxonomy: Salinibacter ruber  →  Salinibacter  →  Bacteroidetes Order II. Incertae sedis  →  Bacteroidetes  →  Bacteria

Taxonomy override: Bacteroidetes

Displaying items 1-50 of 567 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_2_scaffold_968
Order: Bacteroidetes Order II. Incertae sedis (55.56%)
9 8051 bp 61.14 21.87 90.42
qs_2_scaffold_960
Species: Salinibacter ruber (77.78%)
9 8063 bp 62.63 22.06 92.83
qs_2_scaffold_9587
Species: Salinibacter ruber (100%)
2 1683 bp 66.07 20.44 83.07
qs_2_scaffold_9586
Species: Salinibacter ruber (100%)
2 3775 bp 63.34 29.27 90.28
qs_2_scaffold_9564
Species: Salinibacter ruber (100%)
3 2319 bp 64.73 24.79 85.64
qs_2_scaffold_9558
Species: Salinibacter ruber (75%)
4 3869 bp 64.25 20.52 87.23
qs_2_scaffold_9442
Species: Salinibacter ruber (100%)
5 2541 bp 62.34 26.21 79.69
qs_2_scaffold_9412
Species: Salinibacter ruber (100%)
3 1708 bp 65.75 26.05 93.97
qs_2_scaffold_9405
Species: Salinibacter ruber (75%)
4 4045 bp 66.16 34.31 86.55
qs_2_scaffold_9371
Species: Salinibacter ruber (66.67%)
3 2535 bp 61.46 20.20 49.94
qs_2_scaffold_9340
Species: Salinibacter ruber (80%)
5 3209 bp 66.84 28.39 86.94
qs_2_scaffold_9327
Species: Salinibacter ruber (50%)
4 3596 bp 61.87 34.28 81.48
qs_2_scaffold_9290
Species: Salinibacter ruber (100%)
1 1726 bp 65.59 26.01 99.94
qs_2_scaffold_9222
Species: Salinibacter ruber (100%)
2 1737 bp 62.00 20.90 92.92
qs_2_scaffold_9185
Species: Salinibacter ruber (100%)
2 3213 bp 62.99 36.91 76.38
qs_2_scaffold_9149
Species: Salinibacter ruber (100%)
3 2939 bp 64.68 20.24 59.92
qs_2_scaffold_9143
Species: Salinibacter ruber (100%)
3 1747 bp 61.31 20.15 74.87
qs_2_scaffold_9061
Species: Salinibacter ruber (66.67%)
6 4173 bp 64.46 35.08 61.90
qs_2_scaffold_9050
Species: Salinibacter ruber (100%)
4 3645 bp 64.09 35.24 91.28
qs_2_scaffold_8976
Species: Salinibacter ruber (66.67%)
3 3043 bp 62.80 20.56 88.33
qs_2_scaffold_8911
Species: Salinibacter ruber (75%)
8 7291 bp 64.20 36.30 67.60
qs_2_scaffold_8896
Species: Salinibacter ruber (66.67%)
3 1787 bp 61.61 19.92 90.65
qs_2_scaffold_8836
Order: Bacteroidetes Order II. Incertae sedis (60%)
5 3523 bp 66.02 18.85 100.06
qs_2_scaffold_9766
Species: Salinibacter ruber (100%)
2 3083 bp 61.30 19.17 94.10
qs_2_scaffold_9757
Species: Salinibacter ruber (100%)
3 1661 bp 65.20 21.31 92.47
qs_2_scaffold_9696
Species: Salinibacter ruber (50%)
2 1669 bp 65.31 20.85 83.22
qs_2_scaffold_8781
Species: Salinibacter ruber (66.67%)
3 1804 bp 61.09 25.44 83.81
qs_2_scaffold_8751
Species: Salinibacter ruber (100%)
1 1809 bp 62.63 23.27 99.83
qs_2_scaffold_8750
Species: Salinibacter ruber (66.67%)
3 1809 bp 65.34 22.28 99.17
qs_2_scaffold_865
Species: Salinibacter ruber (50%)
16 22573 bp 66.16 33.21 94.02
qs_2_scaffold_8639
Species: Salinibacter ruber (50%)
2 2353 bp 66.77 23.08 78.28
qs_2_scaffold_8626
Species: Salinibacter ruber (100%)
5 3495 bp 63.15 33.22 63.78
qs_2_scaffold_8574
Species: Salinibacter ruber (100%)
3 1837 bp 62.22 24.44 80.19
qs_2_scaffold_8560
Species: Salinibacter ruber (100%)
3 1840 bp 66.36 25.65 96.68
qs_2_scaffold_8542
Species: Salinibacter ruber (66.67%)
3 2669 bp 62.20 25.85 82.95
qs_2_scaffold_8515
Species: Salinibacter ruber (50%)
2 1850 bp 59.84 23.19 45.73
qs_2_scaffold_8485
Species: Salinibacter ruber (100%)
1 2193 bp 62.75 26.08 51.85
qs_2_scaffold_8464
Species: Salinibacter ruber (100%)
2 3183 bp 63.93 43.76 77.95
qs_2_scaffold_8462
Species: Salinibacter ruber (60%)
5 3653 bp 60.28 32.60 75.64
qs_2_scaffold_839
Species: Salinibacter ruber (100%)
8 8762 bp 60.71 20.51 89.19
qs_2_scaffold_8326
Species: Rhodothermus marinus (50%)
2 1884 bp 63.59 25.64 98.89
qs_2_scaffold_8313
Species: Salinibacter ruber (60%)
5 3265 bp 60.31 21.13 71.94
qs_2_scaffold_8308
Species: Salinibacter ruber (100%)
2 3000 bp 64.03 32.40 85.80
qs_2_scaffold_8244
Species: Salinibacter ruber (100%)
4 4470 bp 66.33 36.67 90.94
qs_2_scaffold_8243
Species: Salinibacter ruber (100%)
1 1901 bp 62.49 23.41 94.69
qs_2_scaffold_8196
Species: Salinibacter ruber (100%)
2 1909 bp 59.66 25.35 66.79
qs_2_scaffold_8183
Species: Salinibacter ruber (50%)
4 3282 bp 60.24 22.48 56.03
qs_2_scaffold_8174
Species: Salinibacter ruber (100%)
3 1913 bp 63.83 25.41 98.33
qs_2_scaffold_8151
Species: Salinibacter ruber (50%)
4 3631 bp 60.75 23.33 73.04
qs_2_scaffold_8113
Species: Salinibacter ruber (100%)
3 1926 bp 62.05 20.77 65.42
Displaying items 1-50 of 567 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.