ggKbase home page

qs_2_scaffold_770_18

Organism: QS_2_Halobacteriales_68_15

near complete RP 35 / 55 MC: 3 BSCG 27 / 51 MC: 3 ASCG 37 / 38 MC: 2
Location: comp(15809..16366)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=797114 species="Ar similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 185.0
  • Bit_score: 282
  • Evalue 3.30e-73
2'-5' RNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D661_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 185.0
  • Bit_score: 282
  • Evalue 2.40e-73
ligT; 2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 187.0
  • Bit_score: 254
  • Evalue 2.00e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 558
ATGGGCAAGCGACTGTTCGTCAGCGTCGACCTCGACGGCCTGGCCGAGGACGTCGCGGCCGTCCAGGAACGGTTCGCGGACGCCTCCGGCCTCCGGTTCACCGACCCCGAGCAGGCCCACGTCACGCTGAAGTTCCTCGGCGACACCGACGAAGACCGGGTCCGCTCCGTCTGCGAGGAACTCGACGCAGCGGTCAGGGACGCCGGCGTCGACCCCTTCGAGATGACCGTCTCCGGACTCGGCGTGTTCCCGAGCCTCGATTACATCAGCGTCGTCTGGGTCGGTGTCGACGAGGGGAGCCACGAACTGACCGCGCTCCACGAGGCCATCGAGGAGCGGACCGTCGCGATGGGCTTCGACGCGGCGGACCACGAGTTCACTCCCCACGCCACCATCGCGCGGATGGACCACGCCGGCGGGAAGGAACTCGTCCGGGAGCGGGTCCGCGAGGACGACCCCACGGTGGGACGGGTCGCCGTCAATGAAGTCAGGCTGAAAGAGAGCGTCCTCGGGAGCGACGGGTCGACGTACTCGACCGTCGAACGGTTCGAACTCTGA
PROTEIN sequence
Length: 186
MGKRLFVSVDLDGLAEDVAAVQERFADASGLRFTDPEQAHVTLKFLGDTDEDRVRSVCEELDAAVRDAGVDPFEMTVSGLGVFPSLDYISVVWVGVDEGSHELTALHEAIEERTVAMGFDAADHEFTPHATIARMDHAGGKELVRERVREDDPTVGRVAVNEVRLKESVLGSDGSTYSTVERFEL*