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qs_3_scaffold_115

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_115_1
Chlorokybus atmophyticus, Chlorokybus, Chlorokybales, Chlorokybophyceae, Streptophyta, Viridiplantae

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406..1659
-----------------
DNA (1254bp)
protein (418aa)
Cytochrome b n=1 Tax=Chlorokybus atmophyticus RepID=A6YE94_CHLAT
Cytochrome b {ECO:0000256|RuleBase:RU000300}; TaxID=3144 species="Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae; Chlorokybales; Chlorokybaceae; Chlorokybus.;" source="Chlorokybus atmophyti
cytochrome B
qs_3_scaffold_115_trna_1
unknown

Not on your lists

1638..1709
-----------------
DNA (72bp)
transferRNA
qs_3_scaffold_115_2
Nephroselmis olivacea, Nephroselmis, Nephroselmidophyceae, Chlorophyta, Viridiplantae

Not on your lists

1714..2727
-----------------
DNA (1014bp)
protein (338aa)
NADH-ubiquinone oxidoreductase chain 1 {ECO:0000256|RuleBase:RU000473}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU000473};; TaxID=31312 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Nephrose
NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Nephroselmis olivacea RepID=Q9TCA0_NEPOL
nuoH; NADH-quinone oxidoreductase, subunit H
qs_3_scaffold_115_3
unknown

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2924..3205
-----------------
DNA (282bp)
protein (94aa)

This feature has no annotations

qs_3_scaffold_115_trna_2
unknown

Not on your lists

2994..3065
-----------------
DNA (72bp)
transferRNA
qs_3_scaffold_115_trna_3
unknown

Not on your lists

3094..3181
-----------------
DNA (88bp)
transferRNA
qs_3_scaffold_115_trna_4
unknown

Not on your lists

3191..3263
-----------------
DNA (73bp)
transferRNA
qs_3_scaffold_115_4
Flavobacteria bacterium MS024-2A, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


3551..3889
-----------------
DNA (339bp)
protein (113aa)
30S ribosomal protein S10 n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BGB8_9BACT
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=487796 species="Bacteria; Bacteroidetes; Flavobacteriia.;" source="Flavobacteria bacterium (strain MS024-2A).;"
SSU ribosomal protein S10p
qs_3_scaffold_115_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


3894..4130
-----------------
DNA (237bp)
protein (79aa)
30S ribosomal protein S19 n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00036C67BC
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
30S ribosomal protein S19
qs_3_scaffold_115_6
Marsupiomonas sp. NIES 1824, Marsupiomonas, Marsupiomonadales, Pedinophyceae, Chlorophyta, Viridiplantae

Not on your lists


4115..4849
-----------------
DNA (735bp)
protein (245aa)
Ribosomal protein S3 n=1 Tax=Treubia lacunosa RepID=G4Y9S6_9MARC
30S ribosomal protein S3, chloroplastic {ECO:0000256|HAMAP-Rule:MF_01309, ECO:0000256|RuleBase:RU003626}; TaxID=1562198 species="Eukaryota; Viridiplantae; Chlorophyta; Pedinophyceae; Marsupiomonadales
30S ribosomal protein S3
qs_3_scaffold_115_7
Chlorella variabilis, Chlorella, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

4855..6381
-----------------
DNA (1527bp)
protein (509aa)
NADH dehydrogenase subunit 2 n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1KRF9_MICSR
NADH dehydrogenase subunit 2 {ECO:0000313|EMBL:AIU38967.1}; TaxID=554065 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella.;" source="Chlorella v
NADH-quinone oxidoreductase subunit N
qs_3_scaffold_115_8
Monomastix sp. OKE-1, Monomastix, Monomastigales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

6389..7159
-----------------
DNA (771bp)
protein (257aa)
NADH-ubiquinone oxidoreductase chain 6 {ECO:0000256|RuleBase:RU004430}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU004430};; TaxID=141716 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiell
NADH dehydrogenase subunit 6 n=1 Tax=Monomastix sp. (strain OKE-1) RepID=U5YDX9_MONSK
hypothetical protein
qs_3_scaffold_115_trna_5
unknown

Not on your lists

7416..7489
-----------------
DNA (74bp)
transferRNA
qs_3_scaffold_115_9
Chlorokybus atmophyticus, Chlorokybus, Chlorokybales, Chlorokybophyceae, Streptophyta, Viridiplantae

Not on your lists

7551..7907
-----------------
DNA (357bp)
protein (119aa)
NADH-ubiquinone oxidoreductase chain 3 {ECO:0000256|RuleBase:RU003640}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003640};; TaxID=3144 species="Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae; Chlo
NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Chlorokybus atmophyticus RepID=A6YE80_CHLAT
nuoA; NADH-quinone oxidoreductase, subunit A
qs_3_scaffold_115_trna_6
unknown

Not on your lists

7910..7983
-----------------
DNA (74bp)
transferRNA
qs_3_scaffold_115_10
unknown

Not on your lists

8004..8531
-----------------
DNA (528bp)
protein (176aa)

This feature has no annotations

qs_3_scaffold_115_trna_7
unknown

Not on your lists

8497..8569
-----------------
DNA (73bp)
transferRNA
qs_3_scaffold_115_11
Microspora stagnorum, Microspora, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

8606..10750
-----------------
DNA (2145bp)
protein (715aa)
NADH-ubiquinone oxidoreductase chain 5 {ECO:0000256|RuleBase:RU003404, ECO:0000256|SAAS:SAAS00061106}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003404, ECO:0000256|SAAS:SAAS00061108};; TaxID=163317 species=
putative NADH:ubiquinone oxidoreductase, membrane subunit L (EC:1.6.99.5)
NADH dehydrogenase subunit 5 n=2 Tax=Viridiplantae RepID=U5YGR7_9CHLO
qs_3_scaffold_115_12
Andalucia godoyi, Andalucia, Eukaryota

Not on your lists

10737..12344
-----------------
DNA (1608bp)
protein (536aa)
NADH-ubiquinone oxidoreductase chain 4 {ECO:0000256|RuleBase:RU003297}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003297};; TaxID=505711 species="Eukaryota; Jakobida; Andalucia.;" source="Andalucia godoyi (F
Proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5)
NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Andalucia godoyi RepID=M4QCU1_9EUKA
qs_3_scaffold_115_13
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12469..12903
-----------------
DNA (435bp)
protein (145aa)
50S ribosomal protein L16 n=1 Tax=Azospirillum sp. CAG:260 RepID=R6I1Q2_9PROT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; A
rplP; LSU ribosomal protein L16P
qs_3_scaffold_115_trna_8
unknown

Not on your lists

12894..12967
-----------------
DNA (74bp)
transferRNA
qs_3_scaffold_115_14
Lobosphaera incisa, Lobosphaera, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

13121..13873
-----------------
DNA (753bp)
protein (251aa)
Cytochrome c oxidase subunit 2 n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1KRF7_MICSR
Cytochrome c oxidase subunit 2 {ECO:0000313|EMBL:AKF78669.1}; TaxID=312850 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Lobosphaera.;" source="Lobosph
cytochrome C oxidase subunit II
qs_3_scaffold_115_15
Micromonas sp. RCC299, Micromonas, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

13911..14696
-----------------
DNA (786bp)
protein (262aa)
cytochrome-c oxidase (EC:1.9.3.1)
Cytochrome c oxidase subunit 3 n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1KRF8_MICSR
Cytochrome c oxidase subunit 3 {ECO:0000256|RuleBase:RU003375}; TaxID=296587 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;" so
qs_3_scaffold_115_16
unknown

Not on your lists

comp(14533..14862)
-----------------
DNA (330bp)
protein (110aa)

This feature has no annotations

qs_3_scaffold_115_17
Chlorokybus atmophyticus, Chlorokybus, Chlorokybales, Chlorokybophyceae, Streptophyta, Viridiplantae

Not on your lists

14933..16135
-----------------
DNA (1203bp)
protein (401aa)
NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH dehydrogenase subunit 7 n=1 Tax=Chlorokybus atmophyticus RepID=A6YEB2_CHLAT
NADH dehydrogenase subunit 7 {ECO:0000313|EMBL:ABO15107.1}; TaxID=3144 species="Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae; Chlorokybales; Chlorokybaceae; Chlorokybus.;" source="Chlorok
qs_3_scaffold_115_trna_9
unknown

Not on your lists

16312..16384
-----------------
DNA (73bp)
transferRNA
qs_3_scaffold_115_trna_10
unknown

Not on your lists

16506..16579
-----------------
DNA (74bp)
transferRNA
qs_3_scaffold_115_18
Bathycoccus prasinos, Bathycoccus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

16678..18261
-----------------
DNA (1584bp)
protein (528aa)
Cytochrome c oxidase subunit 1 {ECO:0000256|RuleBase:RU000369}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU000369};; TaxID=41875 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae;
Cytochrome c oxidase subunit 1 n=1 Tax=Bathycoccus prasinos RepID=K8EXI2_9CHLO
cytochrome C oxidase subunit I
qs_3_scaffold_115_16S_1
unknown

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18512..20054
-----------------
DNA (1543bp)
qs_3_scaffold_115_19
unknown

Not on your lists

20085..20528
-----------------
DNA (444bp)
protein (148aa)

This feature has no annotations

Displaying items 1-30 of 69 in total

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