ggKbase home page

qs_3_scaffold_195

Search features with annotation key words

Displaying items 31-60 of 99 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_195_31
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30669..31181
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00036D707D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48974.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_3_scaffold_195_32
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31178..33022
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZBG3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58000.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qs_3_scaffold_195_33
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(33042..34058)
DNA (1017bp) protein (339aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z3D0_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ELY79683.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM
NAD-dependent epimerase/dehydratase
qs_3_scaffold_195_34
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(34281..34538)
DNA (258bp) protein (86aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XP06_9EURY
hypothetical protein
qs_3_scaffold_195_35
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(34539..34781)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FUC7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ62184.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
SpoVT / AbrB-like protein
qs_3_scaffold_195_36
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(34837..35601)
DNA (765bp) protein (255aa)
aglF; sugar nucleotidyltransferase AglF (EC:2.7.7.-)
Sugar nucleotidyltransferase ( glucose-1-phosphate thymidylyltransferase ) 7 n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L8D2_9EURY
Sugar nucleotidyltransferase (Glucose-1-phosphate thymidylyltransferase) 7 {ECO:0000313|EMBL:EMA28185.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halob
qs_3_scaffold_195_37
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

35692..36924
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ95_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46781.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_3_scaffold_195_38
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

36999..37916
DNA (918bp) protein (306aa)
Glycosyltransferase AglG n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C3C4_9EURY
Glycosyltransferase AglG {ECO:0000313|EMBL:ELZ17700.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13
glycosyl transferase family 2
qs_3_scaffold_195_39
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

37975..39246
DNA (1272bp) protein (424aa)
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:AKH97418.1}; EC=1.1.1.22 {ECO:0000313|EMBL:AKH97418.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose/GDP-mannose dehydrogenase n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PNI6_9EURY
qs_3_scaffold_195_40
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

39348..40277
DNA (930bp) protein (310aa)
Nucleoside-diphosphate-sugar epimerase ( dTDP-glucose 4,6-dehydratase) n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PQE7_9EURY
Nucleoside-diphosphate-sugar epimerase (DTDP-glucose 4,6-dehydratase) {ECO:0000313|EMBL:EMA71070.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorub
gmd; GDP-D-mannose dehydratase
qs_3_scaffold_195_41
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

40281..41489
DNA (1209bp) protein (403aa)
LPS glycosyltransferase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KPT6_9EURY
LPS glycosyltransferase {ECO:0000313|EMBL:EMA23196.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
lpg3; LPS glycosyltransferase
qs_3_scaffold_195_42
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(41555..42940)
DNA (1386bp) protein (462aa)
Sulfatase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NSR2_HALUD
sulfatase
Sulfatase {ECO:0000313|EMBL:ACV10723.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (strain DSM 12940 /
qs_3_scaffold_195_43
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

43029..44000
DNA (972bp) protein (324aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HY25_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM56826.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
qs_3_scaffold_195_44
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(44112..45212)
DNA (1101bp) protein (367aa)
Glycosyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMC5_9EURY
Glycosyltransferase {ECO:0000313|EMBL:ELZ24420.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
gtr-2; glycosyltransferase
qs_3_scaffold_195_45
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

45455..45931
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DE45_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ32434.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
DNA polymerase beta domain protein region
qs_3_scaffold_195_46
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(45907..47148)
DNA (1242bp) protein (414aa)
IS1341-type transposase (TCE32) n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9V1_9EURY
IS1341-type transposase (TCE32) {ECO:0000313|EMBL:EMA54353.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
IS1341-type transposase (TCE32)
qs_3_scaffold_195_47
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

47474..48769
DNA (1296bp) protein (432aa)
aglM; UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase AglM {ECO:0000313|EMBL:CCQ37144.1}; EC=1.1.1.22 {ECO:0000313|EMBL:CCQ37144.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriacea
UDP-glucose 6-dehydrogenase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL61_NATM8
qs_3_scaffold_195_48
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

48887..50218
DNA (1332bp) protein (444aa)
ABC-type multidrug transport system, ATPase and permease component n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IBL4_HALRX
ABC-type multidrug transport system, ATPase and permease component
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:AGB15636.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;"
qs_3_scaffold_195_49
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

50166..50597
DNA (432bp) protein (144aa)
ABC-type transport system ATP-binding/permease protein (Probable substrate multidrug/lipids) n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LLK9_HALWC
ABC-type transport system ATP-binding/permease protein (probable substrate multidrug/lipids)
ABC-type transport system ATP-binding/permease protein (Probable substrate multidrug/lipids) {ECO:0000313|EMBL:CCC40815.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; H
qs_3_scaffold_195_50
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

50615..51718
DNA (1104bp) protein (368aa)
gth7; probable glycosyltransferase, type 1 (EC:2.4.-.-)
Probable glycosyltransferase, type 1 {ECO:0000313|EMBL:CCC40826.1}; EC=2.4.-.- {ECO:0000313|EMBL:CCC40826.1};; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae
Probable glycosyltransferase, type 1 n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LLM0_HALWC
qs_3_scaffold_195_51
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(51759..52145)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DMN8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ36063.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
hypothetical protein
qs_3_scaffold_195_52
unknown

Not on your lists

52852..53037
DNA (186bp) protein (62aa)

This feature has no annotations

qs_3_scaffold_195_53
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

53128..54084
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RY70_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB61816.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
qs_3_scaffold_195_54
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

54187..55311
DNA (1125bp) protein (375aa)
gth7; probable glycosyltransferase, type 1 (EC:2.4.-.-)
Probable glycosyltransferase, type 1 {ECO:0000313|EMBL:CCC40826.1}; EC=2.4.-.- {ECO:0000313|EMBL:CCC40826.1};; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae
Probable glycosyltransferase, type 1 n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LLM0_HALWC
qs_3_scaffold_195_55
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

55308..55499
DNA (192bp) protein (64aa)
aglM; UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase AglM {ECO:0000313|EMBL:CCQ37144.1}; EC=1.1.1.22 {ECO:0000313|EMBL:CCQ37144.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriacea
UDP-glucose 6-dehydrogenase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL61_NATM8
qs_3_scaffold_195_56
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

55554..56147
DNA (594bp) protein (198aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00587}; EC=2.1.1.257 {ECO:0000256|HAMAP-Rule:MF_00587};; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Halofer
tRNA (pseudouridine(54)-N(1))-methyltransferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DFQ9_9EURY
hypothetical protein
qs_3_scaffold_195_57
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

56202..56972
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00035D7216
Uncharacterized protein {ECO:0000313|EMBL:ERH05076.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
hypothetical protein
qs_3_scaffold_195_trna_1
unknown

Not on your lists

57024..57096
DNA (73bp)
transferRNA
qs_3_scaffold_195_58
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

57544..58422
DNA (879bp) protein (293aa)
NUDIX family hydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQH8_NATPD
nudF_2; ADP-ribose pyrophosphatase-like protein
NUDIX family hydrolase {ECO:0000313|EMBL:CAI49618.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (str
qs_3_scaffold_195_59
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(58469..59017)
DNA (549bp) protein (183aa)
peptidyl-prolyl cis-trans isomerase cyclophilin type (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family n=1 Tax=halophilic archaeon J07HX5 RepID=U1P981_9EURY
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family {ECO:0000313|EMBL:ERG88696.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic arch
Displaying items 31-60 of 99 in total

View Taxonomy