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qs_4_scaffold_542_25

Organism: QS_4_Salinibacter_ruber_64_15

partial RP 40 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 24528..24857

Top 3 Functional Annotations

Value Algorithm Source
cspD; cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 109.0
  • Bit_score: 165
  • Evalue 9.20e-39
cspD; cold-shock protein; K03704 cold shock protein (beta-ribbon, CspA family) id=24658028 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 109.0
  • Bit_score: 165
  • Evalue 3.30e-38
Putative cold shock-like protein {ECO:0000313|EMBL:CBH25231.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 109.0
  • Bit_score: 165
  • Evalue 4.60e-38

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Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 330
ATGAGGACGAGTACTGTCAAGTGGTTTGACGCCGAGAAAGGCTACGGATTCATCCATCACCCCGACGACGGCGAGGACGTGTTCGTTCACTACTCGAATATTGAGTCGGACGACGACTTCAAGACCCTCCAGAGCGACCAGCGAGTCCAGTTTGAAATGAACGACGGACCGAAAGGGCCGCACGCCCTGGATGTCGTGGCCCTGGACGACGAGGAGGGCGATGCTCGGGGCGAGGAGGCGGCCGGGGACTTCGATCTCTCGGAGATCGATCCCACGGCCCAGGTCGATCCGTCCCCGTCCGGTGGATCCTCTCGGGACCCTTCGCTGTAG
PROTEIN sequence
Length: 110
MRTSTVKWFDAEKGYGFIHHPDDGEDVFVHYSNIESDDDFKTLQSDQRVQFEMNDGPKGPHALDVVALDDEEGDARGEEAAGDFDLSEIDPTAQVDPSPSGGSSRDPSL*