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qs_4_scaffold_15_20

Organism: QS_4_Halosimplex_carlsbadense_69_31

near complete RP 34 / 55 MC: 2 BSCG 27 / 51 MC: 2 ASCG 35 / 38 MC: 1
Location: comp(22479..23297)

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZB9_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 272.0
  • Bit_score: 402
  • Evalue 4.00e-109
Xylose isomerase {ECO:0000313|EMBL:ELZ27973.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 1484 similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 272.0
  • Bit_score: 402
  • Evalue 5.50e-109
xylose isomerase similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 268.0
  • Bit_score: 360
  • Evalue 4.90e-97

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Taxonomy

Halogeometricum pallidum → Halogeometricum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 819
ATGGGTCTCGGGTACACGACACTCATGTACGACGCGGAACGGCTCGAAACCGGCATCGCGGACGTGGGCGCGTGCCGGTACGACGGAGTCGAGGTCGGTCTCGGCAAGGTGCGGGCGGTCGGTCCCGGGGCGGTCGCCGAGTGGCTCGACACCCACGGGCTGGAGCTGTACTGCGTGATGGGCGACTGGCTCGAAACCGACGCCGACGCCCGCGACGTCGCCGACGCGGCGGGAACGGTCGCCGACCTCGGGGCGGAGTTCCTCGGCCTCCTGCCGCCCCAGCGCCACCGCAACGACGACGACACCGTCCGGGAGCGGTTCGCGACCGTCGCCGACGCGGCCCGTGAGGCGGGCCTTACCCCCGTCCTCCACCACCACGGCGGCACCCACGTCGAACGCCCGGACGAGGTCGACCGGTTCCTGGCGGCCGTCGACGGCCTCGAACTCCTCTTCGACACTGCCCACTGGTACCCCTACGGGGAGCACTACCCCGAGGGCGACGTCACCGACGCCGTCGAGCGGTTCGGCGACGACATCGCCTACGTCCACCTCAAGGACGTCGCGCCGACCGCCGATTTCGCCGCGAACCGCGACGCCCTCTCCGGGGGACGGCCCCACCTCGACAACGTCATCAACTACTTCCGGTCGTTCACCGACCTGGGCGAGGGCGTCCTCGATTTCGCGGCGGTCCACGGGGCGCTGGCGGCGGCCGGCTACGACGGCCACTACACCGTCGAGGTCGAGAACCGGACCGAGAAACTGCTGGTCCACGCCAAGGAGAACAAAGCGTACTGGGAGGCGGTCACCGGCGGCCGCTGA
PROTEIN sequence
Length: 273
MGLGYTTLMYDAERLETGIADVGACRYDGVEVGLGKVRAVGPGAVAEWLDTHGLELYCVMGDWLETDADARDVADAAGTVADLGAEFLGLLPPQRHRNDDDTVRERFATVADAAREAGLTPVLHHHGGTHVERPDEVDRFLAAVDGLELLFDTAHWYPYGEHYPEGDVTDAVERFGDDIAYVHLKDVAPTADFAANRDALSGGRPHLDNVINYFRSFTDLGEGVLDFAAVHGALAAAGYDGHYTVEVENRTEKLLVHAKENKAYWEAVTGGR*