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qs_4_scaffold_1048_13

Organism: QS_4_Halosimplex_carlsbadense_68_82

partial RP 36 / 55 MC: 3 BSCG 27 / 51 MC: 2 ASCG 30 / 38 MC: 1
Location: comp(16548..17663)

Top 3 Functional Annotations

Value Algorithm Source
Nonsense mediated mRNA decay protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0L8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 377.0
  • Bit_score: 602
  • Evalue 2.70e-169
Nonsense mediated mRNA decay protein {ECO:0000313|EMBL:ELZ28237.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex ca similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 377.0
  • Bit_score: 602
  • Evalue 3.80e-169
nmd3; nonsense mediated mRNA decay protein similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 377.0
  • Bit_score: 558
  • Evalue 1.30e-156

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1116
ATGAGCCGGTCCGGCGAGTTCTGCCCGCGGTGTGGCGACCCGGTCGAGGCCCCCGAGGAGCGGCCGGACCTCCCCGGGGAGGTCGATAGCGGCCTCTGTGACGCCTGTTATTTCGAGGAGTTCGCCCTCGTCGACGCGCCCGACACCGTCGAAGTGCAGGTCTGTTCGCAGTGCGGGGCGGTCCATCGGGGCAACCGGTGGGTCGACGTCGGCGCCGAGGACTACACCGACGTCGCCGTCGAGGAGGTGTCCGGCGCGCTGGGCGTCCACGTCGACGCCACGGACGTCGGATGGGAGGTCGCCCCCGAGCAGGTCGACGAGAACACCATCCGGATGCACTGCGAGTTCACCGGCGTCGTCCGCGGGACCTTCGTCACCGAGGAGGCGGTCGTCCCCGTCCGGATCGCCCGCGAAACCTGCGACCGCTGTGGCCGGGTCGCCGGCGGGTCCTACGCCAGCCTCGTCCAGGTCCGGGCCGACGAGCGTCCCCCGACCGACGGGGAACTCGCCCGTGCCCGCGAGATCGCGGAAGCCTACATCGCCGACCGCGAGGCCACGGGCGACCGCAACGCCTTCATCACCGAGGTCACGGAGGTCCCCGACGGTCTCGACATGAAGATCTCGACCAACCAGATGGGCGGCGGGATCGCAAAGCGGATCGTCGCACAACTGGGCGGCGGCTTCGAGGACCACGAGACTCTCGTGACCGAGGACGGCGACGGCAACGAGGTCTACCGAGTGACCTACGCGGTCCGCCTGCCGCGATACCGCCCCGGCGAGGTCATCGACCCGGAGGACGGCGACGGGCCGGTGCTCGTCCGGTCGGTCCAGGGCAACCTCAAGGGGGTCCGTCTCGCCAGCGGCGACGCCTACGAGGCGAGCTTCGAGGACAGCGACGCCCCCGAGGCCCGCCGCCTGGGCACCCGCGAGGAGGCCCAGGAGACGACCGTCGTCGCGGTCGAGGACGAACACGCGGTCCAGGTGCTCGACCCCGAGACCTGCGAGGCCCGGACGGTCGCCCGCCCCGACTACCTCGACCCCGACGCCGACGAGGTGCCTGTCCTCAAGAGCCGCGCCGGCCTCCACGTCGTCCCCGAGCGCGATAGCGAGGCGTGA
PROTEIN sequence
Length: 372
MSRSGEFCPRCGDPVEAPEERPDLPGEVDSGLCDACYFEEFALVDAPDTVEVQVCSQCGAVHRGNRWVDVGAEDYTDVAVEEVSGALGVHVDATDVGWEVAPEQVDENTIRMHCEFTGVVRGTFVTEEAVVPVRIARETCDRCGRVAGGSYASLVQVRADERPPTDGELARAREIAEAYIADREATGDRNAFITEVTEVPDGLDMKISTNQMGGGIAKRIVAQLGGGFEDHETLVTEDGDGNEVYRVTYAVRLPRYRPGEVIDPEDGDGPVLVRSVQGNLKGVRLASGDAYEASFEDSDAPEARRLGTREEAQETTVVAVEDEHAVQVLDPETCEARTVARPDYLDPDADEVPVLKSRAGLHVVPERDSEA*