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qs_4_scaffold_5449_5

Organism: QS_4_Halococcus_66_250

partial RP 23 / 55 MC: 2 BSCG 16 / 51 MC: 1 ASCG 18 / 38 MC: 1
Location: comp(3000..3239)

Top 3 Functional Annotations

Value Algorithm Source
Replication factor C small subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDE9_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 78.0
  • Bit_score: 151
  • Evalue 2.70e-34
Replication factor C small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; Short=RFC small subunit {ECO:0000256|HAMAP-Rule:MF_01509};; Clamp loader small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; TaxID=12 similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 78.0
  • Bit_score: 151
  • Evalue 3.80e-34
Replication factor C small subunit similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 78.0
  • Bit_score: 128
  • Evalue 1.20e-27

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Taxonomy

Halococcus salifodinae → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 240
GCCGGCGATTTCACCGCCGCGCGCGCGAAGCTCGACGACCTCCTCACCGACGCCGGATTGGGGGGCGGCGACGTCATCGACCAGCTCCACCGTTCCGCGTGGGCGTTCGATCTCGACGACGCGGCCACCGTCCGGCTGCTGGAGCGCGTCGGCGAGACCGACTACCGGATCACCCAGGGCGCGAACGAGCGCCTCCAGCTGGAGGCGCTGCTCGCCGCGCTCGCGCTCGAAGCGGAGTAA
PROTEIN sequence
Length: 80
AGDFTAARAKLDDLLTDAGLGGGDVIDQLHRSAWAFDLDDAATVRLLERVGETDYRITQGANERLQLEALLAALALEAE*