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qs_5_scaffold_62

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Displaying items 31-60 of 63 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_62_31
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

33739..34158
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI00035ED5C8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40227.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
qs_5_scaffold_62_32
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

34280..36874
DNA (2595bp) protein (865aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=309807 species="Bacteria; Bacte
DNA mismatch repair protein MutS n=1 Tax=Salisaeta longa RepID=UPI0003B47256
MutS2 family protein
qs_5_scaffold_62_33
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

36985..37953
DNA (969bp) protein (323aa)
glyoxylate reductase (EC:1.1.1.26)
Glyoxylate reductase {ECO:0000313|EMBL:AEN74052.1}; EC=1.1.1.26 {ECO:0000313|EMBL:AEN74052.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Glyoxylate reductase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGQ5_RHOMR
qs_5_scaffold_62_34
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

38153..40372
DNA (2220bp) protein (740aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B45FBC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL98950.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
qs_5_scaffold_62_35
Gramella forsetii, Gramella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

40539..41666
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0LZF5_GRAFK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL65750.1}; TaxID=411154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gramella.;" source="Gramella forsetii (strain
qs_5_scaffold_62_36
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

41724..42740
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BQ63_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM82710.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 =
hypothetical protein
qs_5_scaffold_62_37
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

43073..43528
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG74_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47630.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_5_scaffold_62_38
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

43583..47968
DNA (4386bp) protein (1462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Sensory transduction histidine kinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6U4_SALRM
ntrB; sensory transduction histidine kinase
qs_5_scaffold_62_39
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48251..49411
DNA (1161bp) protein (387aa)
Ribonuclease BN n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LZF9_HALO1
ribonuclease BN
Ribonuclease BN {ECO:0000313|EMBL:ACY16421.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochrace
qs_5_scaffold_62_40
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

49718..50284
DNA (567bp) protein (189aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1266370 species="Ba
inorganic diphosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YVH0_9BACT
qs_5_scaffold_62_41
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(50545..51075)
DNA (531bp) protein (177aa)
hypothetical protein
hypothetical protein id=24658933 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24131.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_5_scaffold_62_42
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(51232..52254)
DNA (1023bp) protein (341aa)
porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
Delta-aminolevulinic acid dehydratase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGE7_RHOM4
qs_5_scaffold_62_43
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(52423..53448)
DNA (1026bp) protein (342aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
Cysteine--tRNA ligase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGE8_RHOM4
cysteinyl-tRNA synthetase
qs_5_scaffold_62_44
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(53472..53867)
DNA (396bp) protein (132aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
cysteinyl-tRNA synthetase n=1 Tax=Salisaeta longa RepID=UPI0003B34395
cysS; cysteinyl-tRNA synthetase
qs_5_scaffold_62_45
RLO_PLX_64_10, Bacteria

Not on your lists

comp(54186..56528)
DNA (2343bp) protein (781aa)
ABC transporter permease n=1 Tax=Spirosoma panaciterrae RepID=UPI0003797400
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
cell division protein FtsX
qs_5_scaffold_62_46
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(56629..57276)
DNA (648bp) protein (216aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative signal peptidase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE20_GEMAT
putative signal peptidase I
qs_5_scaffold_62_47
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

comp(57273..57662)
DNA (390bp) protein (130aa)
hypothetical protein id=12553989 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein id=12553989 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
qs_5_scaffold_62_48
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57659..58105)
DNA (447bp) protein (149aa)
AraC family transcriptional regulator n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6524E
Scaffold5, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32302.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
AraC family transcriptional regulator
qs_5_scaffold_62_49
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(58694..59230)
DNA (537bp) protein (179aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFG2_RHOMR
molybdenum cofactor synthesis domain-containing protein
Molybdenum cofactor biosynthesis protein B {ECO:0000256|PIRNR:PIRNR006443}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" sour
qs_5_scaffold_62_50
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(59227..59538)
DNA (312bp) protein (104aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGF0_RHOM4
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
qs_5_scaffold_62_51
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

59682..60080
DNA (399bp) protein (133aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGF2_RHOM4
phosphoribosyl-AMP cyclohydrolase
qs_5_scaffold_62_52
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

60189..60668
DNA (480bp) protein (160aa)
mitochondrial benzodiazepine receptor/sensory transduction protein
mitochondrial benzodiazepine receptor/sensory transduction protein; K07185 tryptophan-rich sensory protein id=24658944 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Mitochondrial benzodiazepine receptor/sensory transduction protein {ECO:0000313|EMBL:CBH24142.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
qs_5_scaffold_62_53
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(60743..62368)
DNA (1626bp) protein (542aa)
NAD dependent epimerase/dehydratase family n=2 Tax=Salinibacter ruber RepID=D5H7Y8_SALRM
NAD dependent epimerase/dehydratase family
NAD dependent epimerase/dehydratase family {ECO:0000313|EMBL:CBH24143.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
qs_5_scaffold_62_54
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

62702..62911
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B33762
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15528.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_5_scaffold_62_55
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

63250..63684
DNA (435bp) protein (145aa)
hypothetical protein
hypothetical protein id=24658947 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24145.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_5_scaffold_62_56
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

64158..65336
DNA (1179bp) protein (393aa)
Peptidase, M50 family protein {ECO:0000313|EMBL:ABC46174.1}; EC=3.4.24.- {ECO:0000313|EMBL:ABC46174.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
Peptidase, M50 family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3S3_SALRD
peptidase, M50 family protein
qs_5_scaffold_62_57
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

65623..66756
DNA (1134bp) protein (378aa)
IS605 family transposase orfB n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4V2_SALRD
IS605 family transposase orfB
IS605 family transposase orfB {ECO:0000313|EMBL:ABC45421.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_5_scaffold_62_58
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

66843..68297
DNA (1455bp) protein (485aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; R
pyruvate kinase n=1 Tax=Salisaeta longa RepID=UPI0003B6E51C
qs_5_scaffold_62_59
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

68382..71216
DNA (2835bp) protein (945aa)
Tetratricopeptide TPR_4 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFD5_RHOMR
hypothetical protein
Tetratricopeptide TPR_4 {ECO:0000313|EMBL:AEN73950.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_5_scaffold_62_60
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

71534..73801
DNA (2268bp) protein (756aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
ATPase AAA n=1 Tax=Salisaeta longa RepID=UPI0003B3A6FB
Displaying items 31-60 of 63 in total

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