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QS_5_Actinobacteria_72_10

In projects: QS_5

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 51-100 of 287 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_5_scaffold_9571
Domain: Bacteria (80%)
5 6339 bp 70.99 10.54 78.04
qs_5_scaffold_5306
Domain: Bacteria (55.56%)
9 10478 bp 68.95 9.53 78.51
qs_5_scaffold_18879
Class: Actinobacteria (75%)
4 3911 bp 73.92 10.53 79.54
qs_5_scaffold_3697
Phylum: Actinobacteria (60%)
5 3859 bp 71.65 9.82 79.61
qs_5_scaffold_15594
Class: Actinobacteria (66.67%)
3 3069 bp 70.80 8.90 79.67
qs_5_scaffold_18384
Species: Beutenbergia cavernae (50%)
2 1268 bp 72.16 9.46 79.73
qs_5_scaffold_6706
Class: Actinobacteria (50%)
6 6373 bp 71.02 10.98 79.79
qs_5_scaffold_7404
Phylum: Actinobacteria (57.14%)
7 5631 bp 70.61 10.26 79.91
qs_5_scaffold_2865
Domain: Bacteria (53.85%)
13 10610 bp 71.07 9.80 80.13
qs_5_scaffold_1942
Domain: Bacteria (66.67%)
9 8333 bp 70.15 9.73 80.32
qs_5_scaffold_1604
Class: Actinobacteria (50%)
8 10701 bp 72.04 10.20 80.35
qs_5_scaffold_5332
Domain: Bacteria (75%)
12 10704 bp 72.92 10.58 80.38
qs_5_scaffold_2153
Domain: Bacteria (80%)
10 7290 bp 71.67 9.96 80.41
qs_5_scaffold_13907
Domain: Bacteria (83.33%)
6 3968 bp 71.14 9.63 80.44
qs_5_scaffold_15484
Phylum: Actinobacteria (57.14%)
7 5676 bp 71.79 10.45 80.60
qs_5_scaffold_21082
Species: RBG_19FT_COMBO_Actinobacteria_70_19_curated (66.67%)
3 3191 bp 74.21 10.00 80.66
qs_5_scaffold_16089
Species: Micromonospora sp. ATCC 39149 (50%)
2 1416 bp 72.60 10.31 80.72
qs_5_scaffold_2873
Phylum: Actinobacteria (69.23%)
13 11492 bp 73.17 10.87 81.42
qs_5_scaffold_30045
Class: Actinobacteria (50%)
4 2040 bp 70.59 8.73 81.47
qs_5_scaffold_2685
Domain: Bacteria (66.67%)
9 6974 bp 72.99 10.67 81.47
qs_5_scaffold_6598
Phylum: Actinobacteria (66.67%)
3 2684 bp 72.58 9.05 81.48
qs_5_scaffold_4272
Class: Actinobacteria (100%)
3 3531 bp 69.47 9.43 81.65
qs_5_scaffold_6392
Class: Actinobacteria (50%)
6 6463 bp 67.58 9.96 81.74
qs_5_scaffold_4218
Class: Actinobacteria (83.33%)
6 3561 bp 70.71 9.88 81.80
qs_5_scaffold_1481
Class: Actinobacteria (68.18%)
22 18546 bp 73.84 10.12 81.85
qs_5_scaffold_5779
Domain: Bacteria (50%)
8 4155 bp 72.42 10.04 81.88
qs_5_scaffold_25664
Domain: Bacteria (60%)
5 1563 bp 72.23 10.43 81.96
qs_5_scaffold_9013
Phylum: Actinobacteria (50%)
8 6346 bp 74.61 10.35 82.02
qs_5_scaffold_5159
Class: Actinobacteria (60%)
5 4022 bp 70.19 9.82 82.12
qs_5_scaffold_3595
Domain: Bacteria (60%)
5 4456 bp 73.16 10.84 82.14
qs_5_scaffold_2253
Class: Actinobacteria (61.11%)
18 17150 bp 72.71 9.85 82.30
qs_5_scaffold_1721
Domain: Bacteria (50%)
14 11361 bp 69.55 10.62 82.31
qs_5_scaffold_5424
Phylum: Actinobacteria (50%)
8 3044 bp 71.12 9.07 82.52
qs_5_scaffold_4186
Domain: Bacteria (57.14%)
7 6104 bp 73.54 9.71 82.57
qs_5_scaffold_3423
Domain: Bacteria (100%)
5 4058 bp 71.00 9.46 82.65
qs_5_scaffold_4478
Phylum: Actinobacteria (58.33%)
12 9311 bp 71.56 10.17 82.77
qs_5_scaffold_2911
Class: Actinobacteria (60%)
5 6134 bp 71.45 10.56 82.85
qs_5_scaffold_4511
Phylum: Actinobacteria (50%)
10 9296 bp 74.01 10.34 82.87
qs_5_scaffold_2454
Domain: Bacteria (80%)
10 10959 bp 73.62 10.29 82.89
qs_5_scaffold_14853
Domain: Bacteria (50%)
8 3407 bp 68.24 10.30 82.95
qs_5_scaffold_5393
Domain: Bacteria (62.5%)
8 6234 bp 73.31 10.43 83.06
qs_5_scaffold_21215
Species: RBG_16_Actinobacteria_70_17_curated (100%)
1 1123 bp 73.37 9.80 83.08
qs_5_scaffold_2646
Domain: Bacteria (83.33%)
6 8003 bp 68.94 9.76 83.14
qs_5_scaffold_2211
Class: Actinobacteria (66.67%)
6 5213 bp 71.44 10.22 83.56
qs_5_scaffold_3750
Class: Actinobacteria (66.67%)
9 8885 bp 70.96 10.71 83.60
qs_5_scaffold_6242
Class: Actinobacteria (50%)
6 6507 bp 72.55 10.24 83.73
qs_5_scaffold_5203
Phylum: Actinobacteria (50%)
4 3133 bp 72.97 10.25 83.79
qs_5_scaffold_6858
Phylum: Actinobacteria (60%)
5 3484 bp 72.70 9.27 83.96
qs_5_scaffold_3451
Phylum: Actinobacteria (54.55%)
11 10824 bp 71.15 10.17 84.06
qs_5_scaffold_25693
Species: Cryptosporangium arvum (50%)
2 1695 bp 70.15 8.73 84.07
Displaying items 51-100 of 287 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.