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QS_5_Actinobacteria_72_10

In projects: QS_5

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 151-200 of 287 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_5_scaffold_4032
Class: Actinobacteria (50%)
8 3656 bp 69.91 10.18 89.20
qs_5_scaffold_20055
Species: Beutenbergia cavernae (100%)
1 1178 bp 74.62 10.19 99.83
qs_5_scaffold_3687
Class: Actinobacteria (50%)
16 11396 bp 72.91 10.19 90.90
qs_5_scaffold_17370
Phylum: Actinobacteria (50%)
4 2237 bp 74.70 10.19 93.47
qs_5_scaffold_7368
Species: Pseudonocardia dioxanivorans (50%)
4 3230 bp 70.99 10.19 101.24
qs_5_scaffold_1694
Class: Actinobacteria (55.56%)
9 8594 bp 72.49 10.19 93.38
qs_5_scaffold_1199
Domain: Bacteria (84.62%)
13 11623 bp 70.62 10.20 85.25
qs_5_scaffold_15725
Class: Actinobacteria (66.67%)
6 5039 bp 73.74 10.20 85.37
qs_5_scaffold_828
Domain: Bacteria (80%)
10 11308 bp 72.56 10.20 87.98
qs_5_scaffold_1604
Class: Actinobacteria (50%)
8 10701 bp 72.04 10.20 80.35
qs_5_scaffold_2512
Class: Actinobacteria (57.14%)
14 14174 bp 71.94 10.21 87.86
qs_5_scaffold_2424
Class: Actinobacteria (50%)
6 8253 bp 74.39 10.21 86.80
qs_5_scaffold_2753
Class: Actinobacteria (70%)
10 8834 bp 71.59 10.21 93.90
qs_5_scaffold_12577
Class: Clostridia (50%)
4 3652 bp 72.92 10.21 86.75
qs_5_scaffold_2211
Class: Actinobacteria (66.67%)
6 5213 bp 71.44 10.22 83.56
qs_5_scaffold_5645
Phylum: Actinobacteria (50%)
6 5498 bp 74.85 10.22 90.52
qs_5_scaffold_35103
Species: Prauserella sp. Am3 (100%)
2 1340 bp 70.60 10.22 104.10
qs_5_scaffold_2531
Phylum: Actinobacteria (57.89%)
19 18874 bp 69.64 10.22 86.74
qs_5_scaffold_2327
Phylum: Actinobacteria (57.14%)
7 7036 bp 71.62 10.23 93.46
qs_5_scaffold_3810
Phylum: Actinobacteria (54.55%)
11 8019 bp 70.59 10.23 86.91
qs_5_scaffold_5444
Domain: Bacteria (62.5%)
8 6712 bp 74.58 10.24 95.07
qs_5_scaffold_6242
Class: Actinobacteria (50%)
6 6507 bp 72.55 10.24 83.73
qs_5_scaffold_5203
Phylum: Actinobacteria (50%)
4 3133 bp 72.97 10.25 83.79
qs_5_scaffold_3271
Domain: Bacteria (60%)
5 4156 bp 71.17 10.25 89.58
qs_5_scaffold_2529
Phylum: Actinobacteria (78.95%)
19 16339 bp 69.94 10.26 94.10
qs_5_scaffold_7404
Phylum: Actinobacteria (57.14%)
7 5631 bp 70.61 10.26 79.91
qs_5_scaffold_2470
Class: Actinobacteria (60%)
5 5873 bp 72.65 10.27 92.41
qs_5_scaffold_1013
Class: Actinobacteria (60%)
10 11544 bp 73.24 10.28 91.91
qs_5_scaffold_5772
Genus: Micromonospora (50%)
4 3405 bp 68.60 10.28 85.11
qs_5_scaffold_2454
Domain: Bacteria (80%)
10 10959 bp 73.62 10.29 82.89
qs_5_scaffold_7642
Domain: Bacteria (100%)
5 5228 bp 74.85 10.29 97.67
qs_5_scaffold_1398
Class: Actinobacteria (54.55%)
11 9965 bp 73.35 10.29 90.86
qs_5_scaffold_14853
Domain: Bacteria (50%)
8 3407 bp 68.24 10.30 82.95
qs_5_scaffold_9621
Species: Micromonospora aurantiaca (50%)
2 2075 bp 71.57 10.31 97.45
qs_5_scaffold_16089
Species: Micromonospora sp. ATCC 39149 (50%)
2 1416 bp 72.60 10.31 80.72
qs_5_scaffold_3619
Domain: Bacteria (75%)
4 4805 bp 69.64 10.32 95.09
qs_5_scaffold_3543
Phylum: Actinobacteria (50%)
4 3969 bp 71.40 10.33 96.90
qs_5_scaffold_4511
Phylum: Actinobacteria (50%)
10 9296 bp 74.01 10.34 82.87
qs_5_scaffold_4328
Domain: Bacteria (80%)
5 3508 bp 74.32 10.35 92.62
qs_5_scaffold_9013
Phylum: Actinobacteria (50%)
8 6346 bp 74.61 10.35 82.02
qs_5_scaffold_4404
Domain: Bacteria (83.33%)
12 6892 bp 73.65 10.37 84.79
qs_5_scaffold_4689
Class: Actinobacteria (66.67%)
3 3347 bp 71.05 10.37 72.51
qs_5_scaffold_18010
Species: Thermobispora bispora (100%)
1 1290 bp 71.94 10.39 100.00
qs_5_scaffold_9401
Class: Actinobacteria (100%)
3 2108 bp 69.59 10.39 67.17
qs_5_scaffold_5499 5 4897 bp 71.55 10.39 72.04
qs_5_scaffold_12132
Species: Streptomyces toyocaensis (50%)
2 2762 bp 71.90 10.39 60.07
qs_5_scaffold_5135
Class: Actinobacteria (60%)
5 5263 bp 72.13 10.39 86.70
qs_5_scaffold_23297
Species: actinobacterium acAMD-2 (50%)
2 1856 bp 67.67 10.40 67.73
qs_5_scaffold_1490
Domain: Bacteria (82.35%)
17 19302 bp 73.29 10.40 89.98
qs_5_scaffold_1995
Class: Actinobacteria (55.56%)
9 7029 bp 71.77 10.40 88.48
Displaying items 151-200 of 287 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.